Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_011373.1 Length=46872 Score E Sequences producing significant alignments: (Bits) Value seq5505 80.6 8e-11 >seq5505 Length=3861 Score = 80.6 bits (88), Expect = 8e-11 Identities = 82/107 (77%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 30747 GAACACATTGCCGACGATGAACCGGTGACCTCCGTTGCGCAGAGTGAAGCCGCGCCACTT 30806 |||||| |||||||||||||| || | || |||||| | ||||| ||| |||||| Sbjct 3647 GAACACGTTGCCGACGATGAAGCGCCGGCCGCCGTTGACCCTCGTGAAACCGATCCACTT 3706 Query 30807 GCGTACCGTTGCATCGTCGATGCTGGCGTCCGCGGTGCTGGGGTTGA 30853 ||| ||||| || ||||||| | ||||||| || || ||||||| Sbjct 3707 GCGCACCGTCGCGTCGTCGAGGGTGGCGTCGGCCGTTGATGGGTTGA 3753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149744778603596