Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq30454 118 4e-21 seq146 113 2e-19 seq2782 95.1 5e-14 seq172 87.8 7e-12 seq22 86.0 2e-11 >seq30454 Length=461 Score = 118 bits (130), Expect = 4e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115 || ||||| || || || |||||||| |||||||| ||||| ||||| ||||| | Sbjct 234 ATCTTCGTCAAGACCCTCACTGGTAAGACTATTACCCTTGAGGTTGAGAGCTCTGACACT 175 Query 391116 ATTGAAGCTATTAAACAAAAA-ATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACG 391174 || || | | |||| | || ||||| || |||||||||||||| ||||| |||||||| Sbjct 174 ATCGAGTC-AGTAAAGACCAAGATTCAGGACAAGGAAGGAATTCCCCCTGACCAACAACG 116 Query 391175 TTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGA 391234 ||| || || | || || || || || |||||| | || | | || || |||||| | Sbjct 115 TTTGATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACCCTCTCCGACTACAATATTCA 56 Query 391235 TAAGGATGCAACACTTCACTTAGT 391258 ||||| | || |||||||| || Sbjct 55 AAAGGAGTCCACCCTTCACTTGGT 32 >seq146 Length=178297 Score = 113 bits (124), Expect = 2e-19 Identities = 150/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115 || |||||||| || || ||||| || ||||||||||| || || || ||||| | | Sbjct 157582 ATCTTCGTTAAGACCCTCACTGGCAAGACTATTACTCTCGAAGTCGAGAGCTCTGACACC 157523 Query 391116 ATTGA-AGCTATTAAACA-AAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAAC 391173 ||||| ||| |||| | || |||||||| ||||| |||||||| ||||| ||||||| Sbjct 157522 ATTGAGAGC--GTAAAGACTAAGATTCAAGACAAGGAGGGAATTCCCCCTGACCAACAAC 157465 Query 391174 GTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTG 391233 | | || ||| | || || ||||| || |||||| | || | | || || || ||| Sbjct 157464 GCCTCATCTTCGCCGGAAAGCAACTCGAGGATGGACGCACCCTCTCCGACTACAACATTC 157405 Query 391234 ATAAGGATGCAACACTTCACTTAGT 391258 | ||||| | || || ||||| || Sbjct 157404 AAAAGGAGTCCACCCTCCACTTGGT 157380 Score = 96.9 bits (106), Expect = 1e-14 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115 || ||||| || || || ||||| || || || |||||||| || || || |||| | Sbjct 156845 ATCTTCGTCAAGACCCTCACTGGAAAGACCATCACTCTTGAGGTAGAGAGCTCCGATACC 156786 Query 391116 ATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGT 391175 || || || | || || || || || ||||||||||| || ||||| ||||||||| Sbjct 156785 ATCGAGTCTGTCAAGACCAAGATCCAGGACAAGGAAGGAATCCCCCCTGACCAACAACGT 156726 Query 391176 TTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGAT 391235 || || ||| | || || ||||| || |||||| | || | | || || || || | Sbjct 156725 TTGATCTTCGCTGGCAAGCAACTAGAGGATGGACGCACCCTCTCCGACTACAACATCCAG 156666 Query 391236 AAGGATGCAACACTTCACTTAGT 391258 ||||| | || || ||||| || Sbjct 156665 AAGGAGTCCACCCTCCACTTGGT 156643 >seq2782 Length=10868 Score = 95.1 bits (104), Expect = 5e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 391037 ATATTATATTATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGA 391096 ||| || ||| | || | |||||||| || || || ||||||||||| ||||| | || Sbjct 9062 ATACTAAGTTAAATTGTAGATTTTCGTCAAGACCCTCACTGGTAAAACCATTACCTTGGA 9003 Query 391097 TGTTGAATCATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAAT 391156 || || ||||| | |||||| | | || || || || || ||||||||||| Sbjct 9002 GGTCGAGAGCTCTGACACCATTGAGTCCGTGAAGACGAAGATCCAGGACAAGGAAGGAAT 8943 Query 391157 TCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTT 391216 || ||||| ||||||||||| || || | || || || || || |||||| | || | Sbjct 8942 CCCCCCTGACCAACAACGTTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGACGCACCCT 8883 Query 391217 GGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGT 391258 | || || || || | ||||| | || || ||||| || Sbjct 8882 CTCCGACTACAACATCCAGAAGGAGTCCACCCTCCACTTGGT 8841 Score = 89.7 bits (98), Expect = 2e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || ||||| ||||| || || || || || || || || || Sbjct 9990 ATGCAGATCTTCGTGAAGACACTCACTGGCAAGACCATCACCCTCGAGGTGGAGAGCTCA 9931 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | || || || || || |||||||||||||| ||||| ||| Sbjct 9930 GACACCATCGAGTCCGTGAAGACCAAGATCCAGGACAAGGAAGGAATTCCCCCTGACCAA 9871 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || || | || || ||||| || |||||| | || | | ||||| || Sbjct 9870 CAACGTCTTATCTTTGCCGGCAAGCAACTAGAGGATGGACGTACCCTCTCTGATTACAAC 9811 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || |||||||| || Sbjct 9810 ATCCAGAAGGAGTCCACCCTTCACTTGGT 9782 Score = 87.8 bits (96), Expect = 7e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115 |||||||| || || || |||||||| || ||||| | || || || ||||||| | Sbjct 9364 ATTTTCGTCAAGACCCTCACTGGTAAGACAATTACCTTGGAGGTCGAGAGCTCTGATACC 9305 Query 391116 ATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGT 391175 || || | | || || || || || ||||||||||| || ||||| |||||||| Sbjct 9304 ATCGAGTCCGTAAAGACTAAGATCCAGGACAAGGAAGGAATCCCCCCTGACCAACAACGC 9245 Query 391176 TTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGAT 391235 | || || | || || ||||| || || ||| | || | | ||||| || ||| | Sbjct 9244 CTCATCTTTGCTGGAAAGCAACTAGAGGACGGACGTACCCTTTCTGATTACAACATTCAG 9185 Query 391236 AAGGATGCAACACTTCACTTAGT 391258 || || | || |||||||| || Sbjct 9184 AAAGAGTCCACCCTTCACTTGGT 9162 Score = 87.8 bits (96), Expect = 7e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115 |||||||| || || || || || || || || || | || || || || || | | Sbjct 9667 ATTTTCGTCAAGACCCTCACGGGCAAGACGATCACCTTGGAGGTGGAGAGCTCGGACACC 9608 Query 391116 ATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGT 391175 ||||| | | || ||| || || || |||||||| || || ||||| ||||||||| Sbjct 9607 ATTGAGTCCGTCAAGACAAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCAACAACGT 9548 Query 391176 TTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGAT 391235 || || ||| | || || ||||| || |||||| | || | | || ||||| || | Sbjct 9547 TTGATCTTCGCTGGAAAGCAACTCGAGGATGGACGTACCCTCTCTGACTATAACATCCAG 9488 Query 391236 AAGGATGCAACACTTCACTTAGT 391258 ||||| | || |||||||| || Sbjct 9487 AAGGAGTCCACCCTTCACTTGGT 9465 >seq172 Length=162977 Score = 87.8 bits (96), Expect = 7e-12 Identities = 170/251 (68%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 219078 ATATCAGGACCACAAGATACACCCTATCAAGATGGATTATTCTTATTTGATTGTTATTTC 219137 ||| |||| ||| | ||||| || ||| || |||| ||||| |||||| ||||||| Sbjct 104023 ATAACAGGTCCAGACGATACGCCATATTCAGGCGGATGTTTCTTGTTTGATATTTATTTC 103964 Query 219138 CCTCATAATTATCCACTAGTACCACCATTAATTAACCTACAAACTACAGGAAATGGTACA 219197 |||| | || ||| | || ||| | | || | || || ||||| |||||| | Sbjct 103963 CCTCCCACATACCCAAACGGTCCTCCACAAGTAAATTTGCAGACGACAGGCAATGGTTCT 103904 Query 219198 GTTAGATTTAATCCCAATTTATATGAGAATGGAAAAGTATGTCTTAGTCTATTAGGAACA 219257 || |||| ||||| ||| |||| | ||| ||||| |||||| || || ||||| Sbjct 103903 GTCCGATTCAATCCTAATCTATACAATTGTGGCAAAGTTTGTCTTTCCCTTTTGGGAACT 103844 Query 219258 TGGACTGGTTCAAATAGTGAAAAATGGAATTCTAAAACATCTACTATGCTTCAAGTAATA 219317 ||| | ||| | | ||||| |||||| | ||||| || |||| || ||| | Sbjct 103843 TGGTCCGGTGCCGAATCCGAAAACTGGAATAAGGACACATCCACCCTGCTGCAGGTACTC 103784 Query 219318 GTTTCTATTCA 219328 || || || || Sbjct 103783 GTCTCCATCCA 103773 >seq22 Length=338851 Score = 86.0 bits (94), Expect = 2e-11 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || || || || || || || || | || || || || Sbjct 331530 AATGCAAATCTTCGTCAAGACCCTCACCGGAAAGACCATCACCTTGGAGGTCGAGAGCTC 331471 Query 391109 TGATAACATTGA-AGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATC 391167 ||||| ||| || ||| | ||||| | | ||||| ||||||||||| || ||||| | Sbjct 331470 TGATACCATCGAGAGCGTGAAGACAAAGA-TCCAAGACAAGGAAGGAATCCCCCCTGACC 331412 Query 391168 AACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATA 391227 ||||||| | || ||| | || || ||||| || |||||| | || | | || || | Sbjct 331411 AACAACGCCTTATCTTCGCCGGAAAGCAACTCGAGGATGGACGCACCCTCTCCGACTACA 331352 Query 391228 ATATTGATAAGGATGCAACACTTCACTTAGT 391258 ||||| | ||||| | || | ||||| || Sbjct 331351 ATATTCAAAAGGAGTCCACCTTGCACTTGGT 331321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1973954350808196