Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq500 87.8 1e-11 >seq500 Length=88253 Score = 87.8 bits (96), Expect = 1e-11 Identities = 185/275 (67%), Gaps = 6/275 (2%) Strand=Plus/Plus Query 518021 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 518080 ||||| || ||||| ||||||||||| | || ||||| ||| || | || | |||| Sbjct 36740 CGATTGTCGAAATCCTCACCTCCCAAGTGCGTGTTTCCACCCGTCGCCTTCACCTCGAAA 36799 Query 518081 AGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATA 518140 | ||| | || | | | || | || || || ||||| |||| || ||||| Sbjct 36800 ACGCCACCCTCGATTGTGAGCAGCGAAACGTCGAACGTGCCACCTCCCAAGTCGAAAATG 36859 Query 518141 AGTACATTCATTTC---TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCA 518197 || | ||| | || || | ||| |||| || || || ||||||| || ||||| Sbjct 36860 AGGATGTTCTTCTCGGATTCGCCTT---TTTTGTCCAGGCCGTACGCAATGGCTGCAGCG 36916 Query 518198 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 518257 || || || || || || | || || || || || || || ||||| ||||| || Sbjct 36917 GTGGGCTCGTTGATGATGCGCAGCACGTTGAGTCCCGCGATGGCCCCTGCGTCTTTTGTT 36976 Query 518258 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAAC 518292 ||||| ||||| ||||| || ||||||||||| Sbjct 36977 GCTTGCCTTTGGCCGTCGTTGAAGTATGCAGGAAC 37011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3777364301511022