Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq6197 304 2e-77 seq832 201 1e-46 seq184 156 5e-33 seq58 118 1e-21 seq10011 96.9 4e-15 >seq6197 Length=3182 Score = 304 bits (336), Expect = 2e-77 Identities = 847/1293 (66%), Gaps = 21/1293 (2%) Strand=Plus/Minus Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 ||| |||||||| || ||||| | || |||||||| || | | || | || || Sbjct 2491 CGTCGAGAAGATCTGGCTCTTCTTGGTCGGGATCGTCGTGTTGCGCTTGATCAGCGCCGT 2432 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||| | || || || |||| || || | ||| || |||||||||| || | ||| Sbjct 2431 CATCACGCCGCCGGCCGTCTCGATGCCCAGCGTCAGCGGCGTCACGTCCAGCAGCAGCAG 2372 Query 6988 GTCTTGAACAGATTCGTTCCCTT--CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 | | | | | | | | ||| | ||||| | |||| ||| || |||| || ||| Sbjct 2371 GCCCTC--CGTCTGCTTGCTCTTGCCGCCCGTCAGGATGAAGGCCTGCACCGCAGCGCCG 2314 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || ||||| ||||| |||||||| || | || ||||| || || ||| || | ||| Sbjct 2313 TACGCGACAGCCTCGTCGGGGTTGATGCTCTTGTTCAGCTCCTTGCCGCCGAAGAAGTCC 2254 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 || | | || | |||||||| || || || || || |||| || | || | | Sbjct 2253 GACACGAGGGACTGCACCTTCGGGATGCGCGTTGACCCGCCCACCAGCACCACGTCGTGC 2194 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225 || || || ||||| | ||| | || || || || | || | Sbjct 2193 ACGGAGCGCTTGTCCATCTTCGCGTCCTGCAGCACGCGCTCCACCGGCTGGATCGTGCTG 2134 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||||| ||| ||||| ||||| || || || || || |||| | | ||| ||| Sbjct 2133 CGGAACAGGTCGCCGCACAGCTCCTCGAAGCGCGCGCGCGTGATGGTGGCCTGGAAGTCA 2074 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 | | ||| | | || || || || || || | || | || || || | ||| ||| Sbjct 2073 ATGTTCTCGAACAGCGCGTCGATCTCGATCGTCGCCTGCGTCGCGGACGACAGCGTGCGC 2014 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTAC-CGGAAATATC 7404 || |||||||| |||||||| || | ||| || || || || || | || | || Sbjct 2013 TTCGCGCGCTCGCACGCCGTGCGCAGACGGCGCAGCGCGCGGTGGCTCGACGCCAGGTTC 1954 Query 7405 TTTCTTATGTT--TACGTTTAAACTCTTCAGAGAAG----TGTCGAAGGAGTCTCGAATC 7458 || | |||| | || || ||||| || | |||| || ||| | || || Sbjct 1953 TTACCCTTGTTCTTGCGCTTGAACTCCTCGGTGAAGAACGTGACGAGGCGGTTG----TC 1898 Query 7459 GAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCC 7518 ||| || || || || | ||||||||| || ||||| || || || ||||| || || Sbjct 1897 GAAGTCCTCGCCGCCAAGGTGTGTATCGCCGTTCGTCGCCTTCACCTCGAAGATGCCGCC 1838 Query 7519 TTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578 || || | | || || ||||||||||| || || || ||||| || || || ||||| Sbjct 1837 GTCGATCGTCAGCAGCGTCACATCAAACGTGCCGCCGCCAAGGTCGAAGATCAGCACGTT 1778 Query 7579 CGTATCGT---CGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || | |||| | | ||| || |||||||||||||| ||||| ||||| || || Sbjct 1777 GCGCTCCTTGCCGTCGTCGCCCTTGTCCAGACCGTACGCGATGGCCGCTGCCGTCGGCTC 1718 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || || || || | |||||||||||| || | || || ||||| || || || Sbjct 1717 GTTGATGATGCGCAGCACCTCCAGGCCAGCAATCGTGCCGGCGTCCTTCGTTGCCTGGCG 1658 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||||| ||||| ||||| ||||| ||||| || || || | | | || | ||| || || Sbjct 1657 CTGCGAGTCGTTGAAGTACGCCGGCACCGTCACCACGGCCTTCTTCACCTGCTTGCCCAG 1598 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 |||| ||||| | || ||||| || || |||||||| ||||| || | || Sbjct 1597 GTACGCCTCCGCCGTCTCCTTCATCTTCAGCAGCACCATCGAGCTGATCTCCTCCGGCGT 1538 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875 || ||| || ||| | | || ||||| ||| || || || | | Sbjct 1537 GAAGGTCTTCTCCTCGCCGCGGTACTGCACCGAAATCACGGGCTTGTCGTCACCCTTCGT 1478 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 | ||||| ||| ||| | ||||| || || || ||| ||||| | Sbjct 1477 CGTCACCTTGAACGGCCAGTGCTTCATGTCCGACTGCACAACCGAGTCGTTGAACTTGCG 1418 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 || || || ||||| || || || || ||||| | |||||||| || |||||||| Sbjct 1417 GCCAATCAGGCGCTTCGCGTCGAACACCGTGTTGTGCGGGTTCATTGCCACCTGGTTCTT 1358 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 || || || ||||| || || || ||||| ||||| |||||||| || ||||| Sbjct 1357 TGCAGCATCGCCGATCAGCCGCTC---CGAGTCCGTGAACGCAACGTACGACGGTGTCGT 1301 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || || || ||||||||||| || || || ||||| ||||| ||||| ||||| ||||| Sbjct 1300 GCGGTTACCCTGGTCGTTCGCGATGATATCCACGCGTTCGTTCTGCCACACGCCTACGCA 1241 Query 8116 CGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 ||| ||||| || || | || || ||||| || Sbjct 1240 CGAGTACGTCGTGCCCAGGTCGATGCCGATGGC 1208 >seq832 Length=54740 Score = 201 bits (222), Expect = 1e-46 Identities = 406/600 (68%), Gaps = 2/600 (0%) Strand=Plus/Minus Query 7124 TTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATC 7183 || ||||| || || |||||||||||||| || || || | |||| || || | Sbjct 35429 TTGGGGATACGGGTAGATCCACCGACCAACACAATCTCGTGGACTTGGCTCTTGCTGAGC 35370 Query 7184 TTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACAC 7243 || | ||| || || || || || || |||| || |||||||||||| || || Sbjct 35369 TTGGCGTCGCGGAGCACCTTCTCCACGGGCTCCAAGCAGCCACGGAACAAGTCAATGCAG 35310 Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || ||||| || | || | ||| ||| |||||||| ||||| || |||| | || Sbjct 35309 AGCTCCTCGAACCTGGCTCTGGTGATGTTGGTATAGAAGTCAACACCCTCGTGGAGGGAG 35250 Query 7304 TCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCC 7363 || ||||| |||| | || | | ||||| || |||| ||| || ||||| || || Sbjct 35249 TCGATTTCGATGGAGGCCTGGGTGCTGGAAGACAAGGTTCTCTTCGCACGCTCGCAGGCG 35190 Query 7364 GTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTA 7423 |||| | ||| || | ||| | | |||| |||| || || ||||| || || || Sbjct 35189 GTTCTGAGACGGCGGATGGCTCTCTGGTTTCCGGTGATGTCCTTCTTGAACTTGCGCTTG 35130 Query 7424 AACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTA 7483 ||||| || |||||| | ||| | |||||| || ||||| || | || || Sbjct 35129 AACTCCTCCATGAAGTGGTTCACGAGGCGGTTATCGAAGTCCTCACCTCCAAGATGGGTG 35070 Query 7484 TCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCA 7543 | || | || | ||||| ||||| | ||| | || ||| | | | || |||||| Sbjct 35069 TTTCCACCAGTGGACTTGACCTCAAACACACCGCTCTCGATGGTAAGGAGGGACACATCA 35010 Query 7544 AACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCG 7603 || |||||||| |||| ||| || ||||| |||||| | ||| | || |||| || Sbjct 35009 AATGTACCACCTCCCAAGTCGAAGATGAGCACGTTCTTCTCGGCCTCGGCAGTCTTGTCC 34950 Query 7604 AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCC 7662 | ||| || || ||||| || || || || || ||||| ||||| || ||| |||| || Sbjct 34949 AAACCATAGGCAATAGCGGCAGCAGTGGGCTCGTTAATGATACGGAGCACA-TTCAAACC 34891 Query 7663 AGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 || ||| ||| | ||||| || || || || || || || || || ||||| || || Sbjct 34890 AGAAATGGTTCCAGCATCCTTGGTGGCCTGGCGCTGGCTGTCATTGAAATAGGCGGGCAC 34831 >seq184 Length=158001 Score = 156 bits (172), Expect = 5e-33 Identities = 304/449 (68%), Gaps = 0/449 (0%) Strand=Plus/Minus Query 7274 GTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAA 7333 || ||||| || || || |||| | ||| || |||||||| | || || | | || Sbjct 106729 GTGTAGAAGTCTACTCCCTCGTGCAGCGAGTCGATTTCAATAGATGCCTGCGTGCTGGAC 106670 Query 7334 GATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTA 7393 || | || | ||| |||||||| |||||||| || || || |||| ||| | |||| Sbjct 106669 GAGAGGGTCCTCTTGGCGCGCTCGCACGCCGTGCGCAAGCGGCGAATGGCCCTTTGGTTC 106610 Query 7394 CCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTC 7453 ||| || || ||||| || || || ||||| || ||| || | | | Sbjct 106609 CCGCTGATGTCCTTCTTGAACTTTCGCTTGAACTCGTCCATGAAATGCGTCACCATGCGG 106550 Query 7454 GAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATA 7513 ||||| || || ||||||| || || | || | ||||| || || || || | Sbjct 106549 TTGTCGAAGTCCTCGCCACCCAGATGCGTGTTGCCACCCGTCGCCTTCACCTCGAACACG 106490 Query 7514 CCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573 || || || || | | || ||| ||||| ||||| ||||| |||||||| ||||| || Sbjct 106489 CCGCCCTCGATCGTGAGCAGCGAGACATCGAACGTCCCACCTCCCAGGTCGAAAATCAGG 106430 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 | |||| | ||| | || || || || || ||||||||||| || || || || || Sbjct 106429 ATGTTCTTCTCGCCCTCGCCTTTTTTGTCCAGGCCGTACGCGATGGCTGCGGCGGTGGGC 106370 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || || || || || || ||| || || || || | | | || ||||||||||||||| Sbjct 106369 TCGTTGATGATGCGCAGCACGTTGAGTCCCGCGATCGCTCCTGCGTCTTTCGTCGCTTGT 106310 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 | ||| ||||| ||||| || ||||| Sbjct 106309 CTTTGGCCGTCGTTGAAGTATGCTGGGAC 106281 >seq58 Length=248088 Score = 118 bits (130), Expect = 1e-21 Identities = 210/304 (69%), Gaps = 2/304 (1%) Strand=Plus/Plus Query 7392 TACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTC 7451 |||| | |||||||||||| || || | ||| || || || ||| || || || | Sbjct 206309 TACCTGTAATATCTTTCTTGTGCTTTCTTTTGAATTCCTCGATGAAATGCGCAACCAGGC 206368 Query 7452 TCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGA 7511 |||||||| || || || | ||| || | || | ||||| ||||| || | Sbjct 206369 GATTGTCGAAATCCTCGCCCCCGAGGTGCGTGTTGCCGCCCGTCGCGCGCACTTCGAAAA 206428 Query 7512 TACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGA 7571 || | ||||| | | || ||| || |||||||| || || |||||||||||||||| Sbjct 206429 CTCCGTCATCAATCGTCAGCAGCGACACGTCAAACGTCCCCCCGCCCAGGTCAAAAATGA 206488 Query 7572 GTACGTTC-GTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTT 7630 | |||||| | | | || || || || || || ||||||||||| || || || || Sbjct 206489 GGACGTTCTGGTCCTTAGTGCTT-TTTTTGTCCAGCCCGTACGCGATCGCGGCTGCGGTG 206547 Query 7631 GGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCT 7690 || || || || || || || ||| || || || || || | || |||||||||||| Sbjct 206548 GGCTCGTTGATGATGCGCAGCACGTTGAGCCCCGCGATCGTCCCTGCGTCTTTCGTCGCT 206607 Query 7691 TGTC 7694 |||| Sbjct 206608 TGTC 206611 >seq10011 Length=1378 Score = 96.9 bits (106), Expect = 4e-15 Identities = 272/410 (66%), Gaps = 11/410 (3%) Strand=Plus/Plus Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503 || |||||||| || ||||| ||| | | ||| || | ||| || ||| || Sbjct 13 TTCTATCAGGCGTCGACATCGGAGTTGTTCGGACTCGTGCAGGAAGTGCCGCAACGGGAG 72 Query 22504 AATACACCGTTTT-ACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGGC 22562 || || || |||| | ||||| || |||| |||||| || || | || ||| Sbjct 73 AACACGCCATTTTTATCCGCGCAGTCCGTATGCGGTAGCGAAGATGTACGCGTACTGGAT 132 Query 22563 GACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCA 22622 || || || ||| | || | || || || | || ||||| || || ||||||| || Sbjct 133 CACGGTCAACTATCGCGAGGCGTATGGCATATACGCTTGCAACGGCATTCTGTTCAATCA 192 Query 22623 CGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAA 22682 ||||| || ||||| || | ||||| || || ||||| || | || |||| Sbjct 193 TGAATCGCCCGTTCGGGGCGAGACGTTCGTTACGCGCAAAATTACGCGCGCCCTCGCACG 252 Query 22683 TATCAGTGCA---GGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGA 22739 ||| |||| ||| || || || | |||||||| || | |||||||| || Sbjct 253 TAT---TGCAATCGGTTCGCAGAATTGCCTTTACCTTGGCAATTTGTCGGCGAAACGCGA 309 Query 22740 TTGGGGTCATGCACGCGATTACGT-GAAATGTATGTGGAAAATATTACAACAAGATAAAC 22798 ||||| || || ||||||||||| | ||| | ||| || || ||||| || | | Sbjct 310 CTGGGGACACGCGCGCGATTACGTCCAGATGCA-ATGGCTCATGTTGCAACAGGACGAGC 368 Query 22799 CGGAAGATTTTGTTATTGCAACAGGCGTAACAACA-ACCGTGAGAGAATT 22847 ||||||| ||||| |||||| | ||||| ||| | | |||| | ||||| Sbjct 369 CGGAAGACTTTGTCATTGCATCTGGCGT-GCAATACAGCGTGCGCGAATT 417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634579543757080