Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq612 141 1e-28 >seq612 Length=73199 Score = 141 bits (156), Expect = 1e-28 Identities = 414/636 (65%), Gaps = 9/636 (1%) Strand=Plus/Plus Query 110127 ACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCG 110186 ||||||||| || || |||||| ||| ||||| || ||||| |||||| Sbjct 23551 ACCAATGGGACGGTGGCGCATGTTGGAGTTACGAGCCTCAGGAACTGGGTAGTAGTTGCC 23610 Query 110187 GTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTA 110246 ||||| | | ||||| || ||| | | ||| |||||||| || || | || Sbjct 23611 ATCGATAATCTTGTTGAGGTTGCGCGTGATAACCTTGGTGATTTCGAAAAGCTTCTGGTG 23670 Query 110247 ATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCA 110306 | |||||| | | || | ||| | || || || |||||||||||||| ||||| Sbjct 23671 GTTGAACGT------CCCATTCTCGACGAACTTAGGTAGCGCAATAGACGCAAGGTTGCA 23724 Query 110307 CACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTT 110366 ||||| | ||||||| |||||||||| | || || || || | |||| || Sbjct 23725 CACAGCAACCTCGTCTGGCGCGGTGTATTCGATTATCTCTGTGCAGAGGTTGCTACAAGA 23784 Query 110367 AATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTA 110426 ||| || | ||| | ||||||||| || |||| | ||||| || |||||||| Sbjct 23785 GATGGTCCCAAGGTTTTGCTGATTCGACTTCCTGTTGGCCGAGTCCTTGTACAGCATGTA 23844 Query 110427 TGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGAC 110486 || |||| || || | || | || ||| ||||| ||| | ||| ||| | Sbjct 23845 CGGATTACCGGTCTCTATTTGAGCCTCGAGGATGGCAAACCACAAATCTTGGGCCTTCAT 23904 Query 110487 AGT-TGCGTTAGCGAGACCT--TCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTG 110543 || | | | | || ||| | || |||||||||||||| ||||| |||| | Sbjct 23905 TGTCTTCCTGGCCAAGCCCTCAGTTTGTTCATACTTGGTGTACAACTCCTCGAATTGTTC 23964 Query 110544 TCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACC 110603 ||| | || |||| ||| || || || | || ||| |||||||||||||| | ||| Sbjct 23965 TCCCCAGACCTCAGCAAGTCCTTTAGCTTCGTTGGGGCAGAAGAGGGACCAGTCACCATT 24024 Query 110604 CTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCA 110663 ||||| || | ||||||||| || || || | ||| | || |||| | ||| || Sbjct 24025 TTCCTCCACACGCTTCATGAAGAGATCTGGGACCCAAAGTGCGTAGAATAAGTCTCGCGC 24084 Query 110664 ACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTG 110723 ||| ||| || | || ||| ||| || || | || || || || | || Sbjct 24085 GCGATTCTCCTCCTTGCCGGTGTTCTTGCGAAGATCGAGGAAAGATATAATGTCAGCATG 24144 Query 110724 CCATGGTTCGAGATAGACAGCGATGGATCCCTTACG 110759 ||| ||||| || || || || | || |||||| || Sbjct 24145 CCAGGGTTCCAGGTAAACTGCAAAGGCTCCCTTTCG 24180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588462950368600