Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30]
69,687 sequences; 205,175,886 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq612 141 1e-28
>seq612
Length=73199
Score = 141 bits (156), Expect = 1e-28
Identities = 414/636 (65%), Gaps = 9/636 (1%)
Strand=Plus/Plus
Query 110127 ACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCG 110186
||||||||| || || |||||| ||| ||||| || ||||| ||||||
Sbjct 23551 ACCAATGGGACGGTGGCGCATGTTGGAGTTACGAGCCTCAGGAACTGGGTAGTAGTTGCC 23610
Query 110187 GTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTA 110246
||||| | | ||||| || ||| | | ||| |||||||| || || | ||
Sbjct 23611 ATCGATAATCTTGTTGAGGTTGCGCGTGATAACCTTGGTGATTTCGAAAAGCTTCTGGTG 23670
Query 110247 ATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCA 110306
| |||||| | | || | ||| | || || || |||||||||||||| |||||
Sbjct 23671 GTTGAACGT------CCCATTCTCGACGAACTTAGGTAGCGCAATAGACGCAAGGTTGCA 23724
Query 110307 CACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTT 110366
||||| | ||||||| |||||||||| | || || || || | |||| ||
Sbjct 23725 CACAGCAACCTCGTCTGGCGCGGTGTATTCGATTATCTCTGTGCAGAGGTTGCTACAAGA 23784
Query 110367 AATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTA 110426
||| || | ||| | ||||||||| || |||| | ||||| || ||||||||
Sbjct 23785 GATGGTCCCAAGGTTTTGCTGATTCGACTTCCTGTTGGCCGAGTCCTTGTACAGCATGTA 23844
Query 110427 TGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGAC 110486
|| |||| || || | || | || ||| ||||| ||| | ||| ||| |
Sbjct 23845 CGGATTACCGGTCTCTATTTGAGCCTCGAGGATGGCAAACCACAAATCTTGGGCCTTCAT 23904
Query 110487 AGT-TGCGTTAGCGAGACCT--TCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTG 110543
|| | | | | || ||| | || |||||||||||||| ||||| |||| |
Sbjct 23905 TGTCTTCCTGGCCAAGCCCTCAGTTTGTTCATACTTGGTGTACAACTCCTCGAATTGTTC 23964
Query 110544 TCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACC 110603
||| | || |||| ||| || || || | || ||| |||||||||||||| | |||
Sbjct 23965 TCCCCAGACCTCAGCAAGTCCTTTAGCTTCGTTGGGGCAGAAGAGGGACCAGTCACCATT 24024
Query 110604 CTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCA 110663
||||| || | ||||||||| || || || | ||| | || |||| | ||| ||
Sbjct 24025 TTCCTCCACACGCTTCATGAAGAGATCTGGGACCCAAAGTGCGTAGAATAAGTCTCGCGC 24084
Query 110664 ACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTG 110723
||| ||| || | || ||| ||| || || | || || || || | ||
Sbjct 24085 GCGATTCTCCTCCTTGCCGGTGTTCTTGCGAAGATCGAGGAAAGATATAATGTCAGCATG 24144
Query 110724 CCATGGTTCGAGATAGACAGCGATGGATCCCTTACG 110759
||| ||||| || || || || | || |||||| ||
Sbjct 24145 CCAGGGTTCCAGGTAAACTGCAAAGGCTCCCTTTCG 24180
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588462950368600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |