Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_014899.1 Length=35203 Score E Sequences producing significant alignments: (Bits) Value seq61051 105 2e-18 >seq61051 Length=235 Score = 105 bits (116), Expect = 2e-18 Identities = 156/212 (74%), Gaps = 8/212 (4%) Strand=Plus/Plus Query 6483 TGTCGAGTTTGGTGGCGAAGGAGCCGTAGAGGGAATTGCTGAGCAGTTTGGCGATGGAGC 6542 |||| || |||||||| || || |||||||||| ||| |||| ||||||||||||| Sbjct 30 TGTCAAGCTTGGTGGCAAACGACCCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGAGC 89 Query 6543 GCATCGTTTGGtttttttCGCGGTCGGCCTGCTCCTTGGCCTGGATGTTGAGGGTGACGT 6602 ||| |||||| |||| |||| ||||| ||||||||||| |||||| || |||| Sbjct 90 GCAGGGTTTGG--TTTTGCGCGATCGGCGCGCTCCTTGGCCGCGATGTT-AGCTGCACGT 146 Query 6603 AGGAGCGGGCCACGCA-GGCCGTCTCGGGAAAAATGGTGGAGCGGGCGTCGTCGAGGACG 6661 | ||| || ||||| ||| | ||||| ||| ||||| ||| || || | | | Sbjct 147 ATTCGCGCGCAACGCACCGCCAT-TCGGG-AAAGCGGTGGTGCGCTCG-CGGGCACCAGG 203 Query 6662 CGCACCTTCCAACCGCGGTTGTGGAGGGTGAC 6693 |||| ||||||| || |||| |||||||| Sbjct 204 TGCACGCGCCAACCGAGG-TGTGCAGGGTGAC 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 112434879352510