Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_015225.1 Length=35499 Score E Sequences producing significant alignments: (Bits) Value seq61051 273 5e-69 >seq61051 Length=235 Score = 273 bits (302), Expect = 5e-69 Identities = 211/242 (87%), Gaps = 8/242 (3%) Strand=Plus/Plus Query 6044 TCCATCTGGTCGGCAAAGACAATCTTTTTGTTGTCGAGCTTGGTGGCGAAGGACCCGTAG 6103 ||||||||||| | |||||||||||||| |||| ||||||||||| || ||||||||| Sbjct 1 TCCATCTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGACCCGTAG 58 Query 6104 AGGGCGTTGGAGAGCAGCTTGGCGATGGAGCGCAGGGTCTGGTTCTTGTCGCGGTCGGCG 6163 ||||||||||| |||| ||||||||||||||||||||| ||||| ||| |||| |||||| Sbjct 59 AGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTT-TTG-CGCGATCGGCG 116 Query 6164 CGCTCCTTGGCGGCGATGTTGAGCTGCACGTACTCGCGCGCCAGGCAGCGCCATCGAGGA 6223 ||||||||||| |||||||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct 117 CGCTCCTTGGCCGCGATGTT-AGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGGA 175 Query 6224 AAGACGGTGGTGCGCTCGTCGGGCAGGAGGCGCACGCGCCAGCCGCGGTTGTGCAGGGTG 6283 ||| |||||||||||||| |||||| ||| |||||||||| ||| || ||||||||||| Sbjct 176 AAG-CGGTGGTGCGCTCG-CGGGCACCAGGTGCACGCGCCAACCGAGG-TGTGCAGGGTG 232 Query 6284 AC 6285 || Sbjct 233 AC 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113381295513134