Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1853 102 1e-16 >seq1853 Length=17124 Score = 102 bits (112), Expect = 1e-16 Identities = 265/402 (66%), Gaps = 8/402 (2%) Strand=Plus/Minus Query 159385 AGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATG 159444 |||||| | ||||| || || | || ||||| ||||||||||| || ||||| |||||| Sbjct 1228 AGAAATATTTGTTTAATTCCCGTTTCCGCACACGGAACTAATCCCGCTTCAGCTGTGATG 1169 Query 159445 GCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGAT 159504 | || | || || || || |||||||| | || || || || |||| Sbjct 1168 GTCGGCTTTAAGGTCGTGCCAGTAGCTTGTGATGAGAACGGTAATATCCTGATTTCAGAT 1109 Query 159505 CTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTA----TTATGATTACATA 159560 | | | || || | ||| ||| | || || || ||||| | ||||| Sbjct 1108 TTGCAACAAAAGGCCG--AAGAACACAA--GGACAATCTTGCTGCCCTTATGTTGACATA 1053 Query 159561 TCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGA 159620 ||| ||||| || || || || ||| | | | | |||||||||||| | || | Sbjct 1052 TCCCTCTACGCACGGAGTGTTCGAAGAGGGGGTGAAAGATATATGTAAGATTATCCACGC 993 Query 159621 GAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAA 159680 ||| || || ||||| || | ||||| || || | || || || || || || Sbjct 992 GAACGGAGGACAGGTGTACATGGATGGAGCCAACATGAACGCGCAAGTGGGCCTGTGTCG 933 Query 159681 ACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCC 159740 || |||| |||||| || || | || | |||||||| ||||| ||||||||||| Sbjct 932 CCCCGCTGACATTGGTGCTGACGTGTTACACATGAACTTACACAAGACTTTCTGTATTCC 873 Query 159741 ACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGC 159782 || |||||||| || ||||| | || || |||||||| || Sbjct 872 TCACGGAGGTGGTGGCCCTGGAATGGGACCCATTGGTGTTGC 831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587538955950320