Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_015295.1 Length=47279 Score E Sequences producing significant alignments: (Bits) Value seq5220 80.6 8e-11 >seq5220 Length=4210 Score = 80.6 bits (88), Expect = 8e-11 Identities = 113/155 (73%), Gaps = 4/155 (3%) Strand=Plus/Plus Query 37618 CCGGTTATAGCATTGTCTCAGTTGAACCGTAATTTGGAGCAGCGTGCAAACAAGCGACCG 37677 ||||| || || | || ||| ||||||| | |||| ||||| | |||||||| ||| Sbjct 1748 CCGGTGATCGCGCTCTCGCAGCTGAACCGCGGTCTGGAACAGCGCCCGAACAAGCGGCCG 1807 Query 37678 TGCAATGCCG-ACTTACGTGAGTCGGGCGTAATCGAGCAGGAAGCTGATGTGATTTTCAT 37736 | ||| || || | ||||| ||||||| |||||||||||| || || || || | | Sbjct 1808 -GTGATGTCGGACCTGCGTGAATCGGGCGCAATCGAGCAGGACGCGGACGTCATCCTGTT 1866 Query 37737 GGTTTATCGCGACGAGAAGTACAACCCGCAGACAG 37771 | ||||||||||| ||||||||| ||||| Sbjct 1867 CATCTATCGCGACGAAGTCTACAACCCG--GACAG 1899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151046100824454