Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq22 159 8e-34 seq146 158 3e-33 seq59190 152 1e-31 seq30454 149 1e-30 seq2782 145 2e-29 seq4405 100 6e-16 seq66879 95.1 3e-14 >seq22 Length=338851 Score = 159 bits (176), Expect = 8e-34 Identities = 154/198 (78%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 |||||||| |||||||||||||| |||| || || | ||||| ||||| ||||| || Sbjct 331333 GTGGACTCCTTTTGAATATTGTAGTCGGAGAGGGTGCGTCCATCCTCGAGTTGCTTTCCG 331392 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 ||||||||||| ||||||||||| || || || ||||| |||||||| || ||| ||| Sbjct 331393 GCGAAGATAAGGCGTTGTTGGTCAGGGGGGATTCCTTCCTTGTCTTGGATCTTTGTCTTC 331452 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 ||| |||| ||||| || || || || || || | ||| | |||||||| || | || Sbjct 331453 ACGCTCTCGATGGTATCAGAGCTCTCGACCTCCAAGGTGATGGTCTTTCCGGTGAGGGTC 331512 Query 195124 TTTACGAACACTTGCATT 195141 || ||||| | ||||||| Sbjct 331513 TTGACGAAGATTTGCATT 331530 Score = 149 bits (164), Expect = 1e-30 Identities = 153/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| |||||||| || ||||| ||||| || | ||| || || ||||| ||| Sbjct 332220 ACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTCCTTCCATCCTCG 332279 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || ||||| || || ||||||||||| || || || || || ||||| || Sbjct 332280 AGTTGCTTGCCAGCGAAAATGAGACGTTGTTGGTCAGGGGGGATTCCCTCCTTGTCCTGG 332339 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| |||| || ||||| || || || || || | |||| |||||| Sbjct 332340 ATCTTAGTCTTGACACTCTCGATAGTGTCAGAGCTCTCGACCTCCAAAGTAATGGTCTTT 332399 Query 195112 CCTGTCAAAGTTTTTACGAA 195131 ||||| | ||| || ||||| Sbjct 332400 CCTGTGAGAGTCTTCACGAA 332419 Score = 140 bits (154), Expect = 7e-28 Identities = 148/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || ||||| || || || ||||| |||| || || | ||||| |||||||| Sbjct 331890 GTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCGAGCTG 331949 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || ||||||||||| ||||||||||| || || || ||||| |||||||| || || Sbjct 331950 CTTGCCAGCGAAGATAAGGCGTTGTTGGTCAGGGGGGATTCCTTCCTTGTCTTGGATCTT 332009 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | ||| ||| |||| ||||| || || || || || || | || | ||||| || || Sbjct 332010 TGTCTTCACGCTCTCGATGGTATCAGAGCTCTCGACCTCCAACGTTATAGTCTTGCCAGT 332069 Query 195117 CAAAGTTTTTACGAA 195131 | ||| || ||||| Sbjct 332070 GAGAGTCTTGACGAA 332084 Score = 123 bits (136), Expect = 6e-23 Identities = 137/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 194949 CTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAA 195008 ||| ||||| || ||||| |||| || || | || || ||||||||||| || ||||| Sbjct 330930 CTCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAA 330989 Query 195009 GATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTT 195068 ||| | ||||||||||| || || || ||||| ||||| || || || ||| || | Sbjct 330990 GATCAAGCGTTGTTGGTCAGGGGGGATTCCTTCCTTGTCCTGGATCTTGGTCTTCACACT 331049 Query 195069 CTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTAC 195128 ||| ||||| || || || || ||||| ||||| | ||||| || ||||| || || || Sbjct 331050 CTCGATGGTATCGGAGCTCTCTACTTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCAC 331109 Query 195129 GAA 195131 ||| Sbjct 331110 GAA 331112 >seq146 Length=178297 Score = 158 bits (174), Expect = 3e-33 Identities = 152/195 (78%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| |||||||| ||||| |||| || || | ||||| ||||| || Sbjct 157385 GTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGTCCATCCTCGAGTTG 157444 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || ||||||||||| || ||||| || || ||||||||||| || Sbjct 157445 CTTTCCGGCGAAGATGAGGCGTTGTTGGTCAGGGGGAATTCCCTCCTTGTCTTGAATCTT 157504 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| ||| ||||||||||||| || || || ||||| || |||| ||||| || || Sbjct 157505 AGTCTTTACGCTCTCAATGGTGTCAGAGCTCTCGACTTCGAGAGTAATAGTCTTGCCAGT 157564 Query 195117 CAAAGTTTTTACGAA 195131 | || || ||||| Sbjct 157565 GAGGGTCTTAACGAA 157579 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| || ||||||||||| ||| || || | || || ||||| || Sbjct 157705 GTGGAGGGTGGACTCCTTCTGAATATTGTAGTCGCTGAGGGTGCGTCCGTCCTCGAGTTG 157764 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || || |||||||| || ||||| || || ||||||||||| || Sbjct 157765 CTTTCCAGCGAAGATGAGGCGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCTTGAATCTT 157824 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | ||||||| |||| |||||||| || || || || || | || | |||||||| || Sbjct 157825 TGTCTTGACGCTCTCGATGGTGTCAGAGCTCTCGACCTCCAACGTGATGGTCTTTCCAGT 157884 Query 195117 CAAAGTTTTTACGAACACTTGCA 195139 | ||||| || || | |||| Sbjct 157885 GAGTGTTTTCACAAAAATCTGCA 157907 Score = 127 bits (140), Expect = 5e-24 Identities = 145/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| ||||| || ||||| |||| || || | ||||| ||||| || Sbjct 157062 GTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGTCCATCCTCGAGTTG 157121 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || || || | ||||||||||| || || || ||||| ||||| || || || Sbjct 157122 CTTGCCAGCAAAAATCAAACGTTGTTGGTCGGGGGGGATTCCTTCCTTGTCCTGGATCTT 157181 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||| ||| |||||||| || || || || ||||| || | |||||||| || Sbjct 157182 GGTCTTGACGGACTCGATGGTGTCGGAGCTCTCGACCTCAAGAGTGATGGTCTTTCCAGT 157241 Query 195117 CAAAGTTTTTACGAA 195131 | || || ||||| Sbjct 157242 GAGGGTCTTGACGAA 157256 Score = 118 bits (130), Expect = 2e-21 Identities = 143/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| || || || ||||| |||| || || | ||||| || || || Sbjct 156648 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCATCCTCTAGTTG 156707 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| | ||||||||||| || || || ||||| ||||| || || || Sbjct 156708 CTTGCCAGCGAAGATCAAACGTTGTTGGTCAGGGGGGATTCCTTCCTTGTCCTGGATCTT 156767 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||| ||| ||||| || || || || || ||||| || | |||||||| || Sbjct 156768 GGTCTTGACAGACTCGATGGTATCGGAGCTCTCTACCTCAAGAGTGATGGTCTTTCCAGT 156827 Query 195117 CAAAGTTTTTACGAA 195131 | || || ||||| Sbjct 156828 GAGGGTCTTGACGAA 156842 >seq59190 Length=243 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| ||||| || ||||| || | |||||| | ||||| ||| Sbjct 240 ACGAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAAAGAGTACGTCCATCCTCG 181 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || |||||||| ||||| || || ||||||||||| Sbjct 180 AGCTGCTTTCCAGCGAAGATGAGACGCTGTTGGTCGGGAGGGATTCCCTCTTTGTCTTGG 121 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| |||| || ||||| || || || |||||||||| ||||| Sbjct 120 ATCTTGGTCTTGACACTCTCGATAGTGTCAGAGGACTCGACCTCAAGGGTAATTGTCTTA 61 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 60 CCCGTGAGGGTCTTGACGAAAATCTGCAT 32 >seq30454 Length=461 Score = 149 bits (164), Expect = 1e-30 Identities = 150/195 (77%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| |||||||| |||||||||||||| |||| || || | ||||| |||||||| Sbjct 37 GTGAAGGGTGGACTCCTTTTGAATATTGTAGTCGGAGAGGGTGCGTCCATCCTCGAGCTG 96 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| | ||||||||||| || ||||| ||||| ||||| ||||| || Sbjct 97 CTTGCCAGCAAAGATCAAACGTTGTTGGTCAGGGGGAATTCCTTCCTTGTCCTGAATCTT 156 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || ||| || ||||| || || || || |||||||||| ||||| || || Sbjct 157 GGTCTTTACTGACTCGATAGTGTCAGAGCTCTCAACCTCAAGGGTAATAGTCTTACCAGT 216 Query 195117 CAAAGTTTTTACGAA 195131 | || || ||||| Sbjct 217 GAGGGTCTTGACGAA 231 >seq2782 Length=10868 Score = 145 bits (160), Expect = 2e-29 Identities = 149/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| |||||||| || || || || || || | || || | ||||| ||||| || Sbjct 9470 GTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGAGAGGGTACGTCCATCCTCGAGTTG 9529 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| | ||||||||||| || || |||||||| ||||| || || || Sbjct 9530 CTTTCCAGCGAAGATCAAACGTTGTTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTT 9589 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | ||||||| ||||||||||||||| || ||||| || | ||| | |||||| || || Sbjct 9590 TGTCTTGACGGACTCAATGGTGTCCGAGCTCTCCACCTCCAAGGTGATCGTCTTGCCCGT 9649 Query 195117 CAAAGTTTTTACGAA 195131 | || || ||||| Sbjct 9650 GAGGGTCTTGACGAA 9664 Score = 138 bits (152), Expect = 3e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| |||||||| || || || |||||||| | || || | ||||| || || || Sbjct 9787 GTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAGAGGGTACGTCCATCCTCTAGTTG 9846 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || |||||||| ||||||||||| || ||||| ||||| ||||| || || || Sbjct 9847 CTTGCCGGCAAAGATAAGACGTTGTTGGTCAGGGGGAATTCCTTCCTTGTCCTGGATCTT 9906 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| ||| ||| |||||||| || || ||||| || ||||| | ||||| || || Sbjct 9907 GGTCTTCACGGACTCGATGGTGTCTGAGCTCTCCACCTCGAGGGTGATGGTCTTGCCAGT 9966 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 9967 GAGTGTCTTCACGAAGATCTGCAT 9990 Score = 127 bits (140), Expect = 5e-24 Identities = 145/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| ||||||||||| ||||| |||||||| | ||| || | || || || || || Sbjct 9167 GTGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGAAAGGGTACGTCCGTCCTCTAGTTG 9226 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| || ||||||||||| || || || ||||| ||||| || || || Sbjct 9227 CTTTCCAGCAAAGATGAGGCGTTGTTGGTCAGGGGGGATTCCTTCCTTGTCCTGGATCTT 9286 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| ||| ||| ||||| || || || || || || | ||||| ||||| || || Sbjct 9287 AGTCTTTACGGACTCGATGGTATCAGAGCTCTCGACCTCCAAGGTAATTGTCTTACCAGT 9346 Query 195117 CAAAGTTTTTACGAA 195131 | || || ||||| Sbjct 9347 GAGGGTCTTGACGAA 9361 Score = 122 bits (134), Expect = 2e-22 Identities = 144/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| || || || ||||| |||| || || | ||||| |||||||| Sbjct 8846 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCATCCTCGAGCTG 8905 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| | ||||||||||| || || || ||||| ||||| || || || Sbjct 8906 CTTGCCGGCAAAGATCAAACGTTGTTGGTCAGGGGGGATTCCTTCCTTGTCCTGGATCTT 8965 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| ||| |||||||||||| || || || || || | ||||| || || || || Sbjct 8966 CGTCTTCACGGACTCAATGGTGTCAGAGCTCTCGACCTCCAAGGTAATGGTTTTACCAGT 9025 Query 195117 CAAAGTTTTTACGAA 195131 | || || ||||| Sbjct 9026 GAGGGTCTTGACGAA 9040 >seq4405 Length=6695 Score = 100 bits (110), Expect = 6e-16 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| ||||| || ||||| || | |||||| | ||||| ||| Sbjct 6082 ACGAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAAAGAGTACGTCCATCCTCG 6141 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 |||||||| || |||||||| || || |||||||| ||||| || ||| Sbjct 6142 AGCTGCTTTCCAGCGAAGATGAGACGCTGTTGGTCGGGAGGGATTCCT 6189 >seq66879 Length=210 Score = 95.1 bits (104), Expect = 3e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || ||| ||| ||||| || ||||| ||| | ||| | ||||| || Sbjct 85 ACAAGGTGCAGTGTGCTCTCCTTTTGGATGTTGTAGTCGCTCAAAGTGCGACCATCCTCC 144 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | |||||| || |||||||| | || |||||||| || || || ||||||||||| ||| Sbjct 145 AACTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCAGGGGGGATTCCTTCTTTGTCCTGA 204 Query 195052 ATTTT 195056 ||||| Sbjct 205 ATTTT 209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108490983057929