Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_016895.2 Length=31806 Score E Sequences producing significant alignments: (Bits) Value seq61051 158 2e-34 >seq61051 Length=235 Score = 158 bits (174), Expect = 2e-34 Identities = 184/241 (76%), Gaps = 8/241 (3%) Strand=Plus/Plus Query 5670 TCTATTTGGTCAGAAAACACCGTCTTTTTGTTGTCAAGCTTGGTGGCGAAGGAGCCGTAG 5729 || || ||||||||||| || |||||| |||||||||||||||| || || |||||| Sbjct 1 TCCATCTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGACCCGTAG 58 Query 5730 AGGGCGTTGGAGAGCAGCTTGGCTATGCTGCGCATGGTTTGGTTTTTATTTTTGTCTGCC 5789 ||||||||||| |||| |||||| ||| ||||| ||||||||||| || || Sbjct 59 AGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTTTT--GCGCGATCGGCG 116 Query 5790 TGCTCTTTGGCCTGGATGTTTAGCTGCACGTACTCGCGCGCGAGACACTTCCACTCGGGG 5849 |||| |||||| |||| ||||||||||||| |||||||| | ||| ||| ||||| Sbjct 117 CGCTCCTTGGCCGCGATG-TTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGGA 175 Query 5850 AAGACGGTGGCGCGGGCGTCGGGCACAAAGCGCACCTTCCAGCCTCTGTTGTGTAGGGTG 5909 ||| |||||| ||| || ||||||| | | |||| ||| || | |||| |||||| Sbjct 176 AAG-CGGTGGTGCGCTCG-CGGGCACCAGGTGCACGCGCCAACC-GAGGTGTGCAGGGTG 232 Query 5910 A 5910 | Sbjct 233 A 233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101573474968592