Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq42113 95.1 1e-14 seq1429 82.4 9e-11 >seq42113 Length=344 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 78230 TGATGTTATTGGAATTGATGAAGGTCAATTTTTTAATGATATAGTGGAATTTTCTGAAAA 78289 |||||| |||||||||||||| ||||||||||| ||| ||||| ||| || || Sbjct 132 TGATGTCATTGGAATTGATGAGGGTCAATTTTTCCCGGATTTAGTGAGCTTTAGCGAGAA 191 Query 78290 TATGGCAAATAAAGGAAAAATTGTTATTGTTTCGGCATTAGATGCTACATATCAAAGAAA 78349 ||||| ||| |||||| | || ||||| | ||| |||||| ||||| || |||| Sbjct 192 AATGGCCAATGGAGGAAAGACAGTAATTGTGGCAGCACTAGATGGTACATTCCAGCGAAA 251 Query 78350 AACATTTGGTAATATTCTAAATTTAATTCCATTATCTGAAAAGGTAATAAAATTAAATGC 78409 ||||||| | || || | | |||||| | |||| || | |||| | | ||| Sbjct 252 GCCATTTGGAAGCGTTTTAGAAATCATTCCAGTTGCTGAGCTTGTGACAAAACTTACTGC 311 Query 78410 TATATGTAAAATATGTTTTAATGATGC 78436 | | |||| | || ||||| ||||| Sbjct 312 TGTTTGTATGGTGTGCTTTAAAGATGC 338 >seq1429 Length=23345 Score = 82.4 bits (90), Expect = 9e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 37476 TCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAAT 37535 || ||||||||||| ||||| || || || || |||||||| || | ||| |||| | Sbjct 7476 TCGGAGTGAATATTCTCAATGGCGATTTGGAATCCATAAAAGCAGCGAGCCTCAGGGATC 7417 Query 37536 TGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCA 37595 || || || | | || | | || | ||| ||||| || || |||||||| || ||| Sbjct 7416 TGTACTTCTTGCATGAAACGAGTTGCAAGGTTCTCATTCACAATTCCATCACTGGCAGCA 7357 Query 37596 AAGAAAGCAAGAACA 37610 ||||||||||| ||| Sbjct 7356 AAGAAAGCAAGGACA 7342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591800840239480