Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_017825.1 Length=36711 Score E Sequences producing significant alignments: (Bits) Value seq61051 212 1e-50 >seq61051 Length=235 Score = 212 bits (234), Expect = 1e-50 Identities = 196/241 (81%), Gaps = 8/241 (3%) Strand=Plus/Plus Query 6090 TCCATCTGGTCAGAAAAGACGAtttttttGTTGTCGAGCTTGGTGGCGAAGGAGCCGTAG 6149 |||||||||||||||||||| || |||| |||| ||||||||||| || || |||||| Sbjct 1 TCCATCTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGACCCGTAG 58 Query 6150 AGGGCGTTGGAAAGGAGCTTGGCGATGGAGCGCATGGTCTGGtttttttCCTTGTCGGCG 6209 ||||||||||| || | ||||||||||||||||| ||| ||| |||| | |||||| Sbjct 59 AGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGG--TTTTGCGCGATCGGCG 116 Query 6210 CGCTCCTTGGCCGCGATGTTGAGCTGCACGTACTCGCGCGCCACGCACTTCCATTCGGGG 6269 |||||||||||||||||||| ||||||||||| |||||||| |||||| ||||||||| Sbjct 117 CGCTCCTTGGCCGCGATGTT-AGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGGA 175 Query 6270 AAGACGGTGGTCATCTCGTCGGGCACGATTCTGACCTGCCAACCTCGATTATGCAGGGTG 6329 ||| ||||||| |||| ||||||| | || ||||||| | | ||||||||| Sbjct 176 AAG-CGGTGGTGCGCTCG-CGGGCACCAGGTGCACGCGCCAACCGAG-GTGTGCAGGGTG 232 Query 6330 A 6330 | Sbjct 233 A 233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117256486008662