Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_017981.1 Length=49981 Score E Sequences producing significant alignments: (Bits) Value seq4462 89.7 2e-13 >seq4462 Length=5303 Score = 89.7 bits (98), Expect = 2e-13 Identities = 199/296 (67%), Gaps = 7/296 (2%) Strand=Plus/Plus Query 25978 ACAATTTCAGTGGTGTAGCGCTCAACGCCGTCCTT---TTCCCACTTGCGGGTTTTCAGT 26034 || ||||| || | |||||| || |||||||| || ||| ||||| || | | Sbjct 4796 ACGATTTCCGTCGAGTAGCGGTCGGTGCCGTCCTGCGCTTGCCATTTGCGCGTG--CGGA 4853 Query 26035 TGC--CCCTCAATGTAAACCTGTGAACCTTTCTTCAGGTACTCGCCCGCGATCTCCGCTA 26092 ||| || || || || ||| ||||| |||||||||||||| ||||||| || | Sbjct 4854 TGCGGCCTTCGATATACACCGACGAACCCTTCTTCAGGTACTCCGAGACGATCTCGGCCA 4913 Query 26093 CCTTGCCAAACAGCACGACGCGATGCCATTCTGTCACTTCTTTCTTTTCGCCGGTCTGCT 26152 || || | | ||||| |||||||| |||| ||| || ||||||| | || Sbjct 4914 GGCGCCCGAAGAACGACACGCGGTGCCATTCGGTCATTTCCTTGAACTCGCCGGACGCCT 4973 Query 26153 TATCGTTCCAGCTTTCTGAGGTCGCTACGGTAATGTTGGCGACTGCGCCGCCATTAGGCA 26212 | || || ||| || | || || | | |||||| || || ||| |||| | |||| Sbjct 4974 TGTCCTTGTAGCGGTCGGTCGTGGCGAGGCGAATGTTCGCCACGGCGTCGCCGCTCGGCA 5033 Query 26213 TGTAACGGATCTCTGGATCGTTCCCCAGGTTACCGACAAGGATTACTTTATTTACG 26268 || || | || |||||| || ||||| ||||| ||||| || || || ||| Sbjct 5034 GATAGCGCACTTCCGGATCGGCGCCGAGGTTGCCGACGAGGATCACCTTGTTCACG 5089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159685345642042