Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_018282.1 Length=61167 Score E Sequences producing significant alignments: (Bits) Value seq4028 98.7 4e-16 >seq4028 Length=6092 Score = 98.7 bits (108), Expect = 4e-16 Identities = 122/162 (75%), Gaps = 4/162 (2%) Strand=Plus/Minus Query 6575 CGCCCGGGCGCTGTGGGACGCGATCATGCGCGGGACCTGGGATTGGGCGGAGCCGGGCGT 6634 |||||| ||||||||||| ||||||||||| ||||| || ||| ||||||||||| Sbjct 3163 CGCCCGCGCGCTGTGGGATGCGATCATGCGTTCGACCTACGACGTGGCCGAGCCGGGCGT 3104 Query 6635 GCTGTTCATCGACGCG-ATCAACCGCATGAACAACCT-CTGGTACTGCGAGACCATCGCC 6692 | |||||||| |||| || ||| |||||||| | | || ||| ||||| | Sbjct 3103 GGTGTTCATC-TCGCGCATGAACGAGGACAACAACCTGCGCGCGCT-CGAATCCATCCGC 3046 Query 6693 GCCACCAACCCCTGCGGTGAGCAACCCCTCCCGCCCTACGGT 6734 || |||||||| ||||| ||||| || || || |||||||| Sbjct 3045 GCGACCAACCCGTGCGGCGAGCAGCCTCTGCCCGCCTACGGT 3004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 195450923928326