Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_018843.1 Length=103299 Score E Sequences producing significant alignments: (Bits) Value seq4385 89.7 3e-13 >seq4385 Length=5426 Score = 89.7 bits (98), Expect = 3e-13 Identities = 187/275 (68%), Gaps = 8/275 (3%) Strand=Plus/Plus Query 79547 GCACGACCAACAATCGGATGGAGATGATGGGCGCCCTGAT---TGCGCTGGA-GCGTCTG 79602 ||||||||||||| || ||||| ||||| || |||| || || || ||| || Sbjct 4274 GCACGACCAACAACCGCATGGAACTGATG---GCGGTGATCGCCGCACTCGACGCG-CTC 4329 Query 79603 AAGTACCCCTGCAACGTGATCCTGCATTCCGACAGCCAGTATCTAAAAAACGGCATGACG 79662 ||| ||| ||||| |||||| |||| ||||| || || | |||| ||||| | Sbjct 4330 AAGCGCCCGTGCAAGGTGATCGTGCACACCGACTCGCAATACGTGCAAAAAGGCATCAGC 4389 Query 79663 CTCTGGATGAAAGGCTGGAAGCGTAACGGATGGATCACGTCTGAGAAGAAGCCAGTCAAA 79722 ||||| | ||||||||| || ||||| ||| | | || | ||| ||||| Sbjct 4390 GAGTGGATTCACGGCTGGAAGAAGAAGAACTGGATGACGGCCGCCAAAACGCCGGTCAAG 4449 Query 79723 AACGTCGATCTCTGGAAACGTCTTGATGCGGCCGCCAGCCGTCACAATGTCCGCTGGAAG 79782 |||| ||| |||||||| || || || || || | | | ||| | || ||| Sbjct 4450 AACGACGACCTCTGGAAGCGACTGGACTCGCTCGTCGCCAGGCACGAGATCGAGTGGCGC 4509 Query 79783 TGGGTTAAAGGTCATGCCGGTCATCGCGAGAACGA 79817 ||||| || ||||| ||||| |||| |||||||| Sbjct 4510 TGGGTGAAGGGTCACGCCGGCCATCCGGAGAACGA 4544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330151360694820