Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_019407.1 Length=218929 Score E Sequences producing significant alignments: (Bits) Value seq6342 91.5 2e-13 >seq6342 Length=3070 Score = 91.5 bits (100), Expect = 2e-13 Identities = 185/272 (68%), Gaps = 2/272 (1%) Strand=Plus/Plus Query 27105 GTCGAGGACCGCGACCTGTGGCGCTTCAACCAGGAAGGCTCGCGCGAGGTCTCGGCCTAC 27164 ||||||||||||||||| ||||| ||||| | | ||| | | ||| | ||| | | Sbjct 1660 GTCGAGGACCGCGACCTCTGGCGATTCAAGCTTGCCGGCACCAGGGAGATTCAGGCGTTC 1719 Query 27165 ATCTTCGCCCACGACTACCGCTTCGACAACTGGGACGCCCTGGCCGGCG-AGATCGAGAT 27223 ||||| ||||||| ||| ||||| ||||| ||| |||| ||||| || Sbjct 1720 GTCTTCTCCCACGAATACACATTCGAACTATGGGATCGCCTCATGGGCGCAGATC-AGGC 1778 Query 27224 CGACCTCCCGACGGTGATCGCCGCCGGGGCGGCGATCGAGAAGAAGCACCACAAGGACAT 27283 || ||| || | ||| ||||| || || ||||||||| |||||| |||||||| || Sbjct 1779 TGAACTCGTGAAGATGACGGCCGCGGGCGCCGCGATCGAGCGGAAGCATCACAAGGATAT 1838 Query 27284 CGGCGAGCTTCTGCGCCAGACCCAGCGCGAGATGATCATCGGCGGCTACCGCGTGCCGGT 27343 | |||||| || ||||| || | |||| ||| ||| |||||| || Sbjct 1839 TGCCGAGCTGGTGAAGGTTTGTAAGCGCCGCGTGGTGATCGCCGGTTACGACGTGCCAGT 1898 Query 27344 CGCCAATATGCCCTACACCCTGGCCAGCGACG 27375 || | | ||||||||| || | ||||||| Sbjct 1899 TGCGAGCCTACCCTACACCATGTCGAGCGACG 1930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 699834651290280