Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_019408.1 Length=223720 Score E Sequences producing significant alignments: (Bits) Value seq6342 107 3e-18 >seq6342 Length=3070 Score = 107 bits (118), Expect = 3e-18 Identities = 197/282 (70%), Gaps = 5/282 (2%) Strand=Plus/Plus Query 28408 ACGTCGAGGACCGCGACCTCTGGCGCTTCGACCAGGAAGGCTCGCGCGAGGTCTCGGCCT 28467 ||||||||||||||||||||||||| ||| | | | ||| | | ||| | ||| | Sbjct 1658 ACGTCGAGGACCGCGACCTCTGGCGATTCAAGCTTGCCGGCACCAGGGAGATTCAGGCGT 1717 Query 28468 ACATCTTCGCCCACGACTACACGTTCG-ACAACTGGAACGCCCTGGCCGGCG-AGATCGA 28525 | ||||| ||||||| ||||| |||| || | ||| || ||| |||| ||||| | Sbjct 1718 TCGTCTTCTCCCACGAATACACATTCGAACTATGGGATCG-CCTCATGGGCGCAGATC-A 1775 Query 28526 GATCGACCTGCCCACGGTGATCTCCGCCGGCGCGGCGATCGAGAAGAAGCACCACAAGGA 28585 | || || | | ||| |||| ||||| ||||||||| |||||| |||||||| Sbjct 1776 GGCTGAACTCGTGAAGATGACGGCCGCGGGCGCCGCGATCGAGCGGAAGCATCACAAGGA 1835 Query 28586 CATCGGCGAGCTTCTGCGCCAGACCAAGCGCGAGATGATCATCGGCGGCTACCGCGTGCC 28645 || | |||||| || |||||| || | |||| ||| ||| |||||| Sbjct 1836 TATTGCCGAGCTGGTGAAGGTTTGTAAGCGCCGCGTGGTGATCGCCGGTTACGACGTGCC 1895 Query 28646 GGTCGCCAACATGCCCTACACCCTGGCCAGCGACG-CGGCCA 28686 || || | | | ||||||||| || | ||||||| |||||| Sbjct 1896 AGTTGCGAGCCTACCCTACACCATGTCGAGCGACGCCGGCCA 1937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715152496473600