Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_019445.1 Length=44784 Score E Sequences producing significant alignments: (Bits) Value seq1282 89.7 1e-13 >seq1282 Length=26080 Score = 89.7 bits (98), Expect = 1e-13 Identities = 109/145 (75%), Gaps = 4/145 (3%) Strand=Plus/Minus Query 8419 TGGTATCGGTTCGAGGGTATCAAGCTGCGGCTGGCTGACAACACGTTCTATACGCCCGAT 8478 |||| ||| ||||| ||| | || | ||||| |||||| ||||||||| |||||||| Sbjct 23159 TGGTTTCGCTTCGAAGGTCTGAAATTCCGGCTTGCTGACCGCACGTTCTACACGCCCGAC 23100 Query 8479 TTTGCTGTGATGCTCGCCACCGGCGAGATGGAACTGCACGAAGTGAAAGG--TTTCTGGA 8536 || || ||||| |||| | ||||| | | |||||||||| |||| |||| || |||| Sbjct 23099 TTCGCGGTGATCGTCGCGAGCGGCGCGCTCGAACTGCACG-AGTGCAAGGGATTCATGGA 23041 Query 8537 CCGACGACGCCAGGGTGAAAACCAA 8561 || ||||| | ||||| | ||| Sbjct 23040 -GGAAGACGCGAACGTGAAGATCAA 23017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143068707848924