Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_019488.1 Length=34117 Score E Sequences producing significant alignments: (Bits) Value seq2320 464 1e-126 >seq2320 Length=11620 Score = 464 bits (514), Expect = 1e-126 Identities = 1479/2265 (65%), Gaps = 95/2265 (4%) Strand=Plus/Plus Query 11833 TTCATTACGTACAAATACTTTCGCTGCCTTCTCCACATCCCCAAACCCCCCAACATTACT 11892 ||||||||| | ||||| | || ||| | || | | ||||| || || ||| || Sbjct 7382 TTCATTACGCCCGAATACCTCGGCGGCCGTGTCGGCCGCGCCAAATCCGCCGGTATTGCT 7441 Query 11893 CGGCATAATCCCCATCATCTGCGGCGGAACGCGGTGTGCTGCCATCATGTCATCGCGGCT 11952 ||||| |||||||| | |||||| || | ||| || || || | || ||| ||||| | Sbjct 7442 CGGCACGATCCCCATGAGCTGCGGGGGGATGCGATGCGCCGCGAGCAAGTCGTCGCGCGT 7501 Query 11953 CACGTTCTTGATGTTCAAAAACTCATCCTTAGCTGCAACCTCCGAAAGTGGAATGATTTG 12012 || |||||||| || |||||||| || || || | ||||| |||| ||||||| || Sbjct 7502 GACATTCTTGATATTGAAAAACTCGTCTTTCGCCGTGACCTCGGAAACGGGAATGAGCTG 7561 Query 12013 GATACCGTCCTTTTTACCGTTGGGCGAGTACATAAACAGGTTGCGGAAGTTGCCCGGCCC 12072 ||||||||| || || ||||| |||| |||||| |||||||| ||||| ||||| ||||| Sbjct 7562 GATACCGTCTTTCTTGCCGTTCGGCGCGTACATGAACAGGTTTCGGAAATTGCCTGGCCC 7621 Query 12073 TTTGGCGCTTTTCATTGCCTGGCGGATGTTGTTCACGTCCTCCTGGTTCTGCGCGGCGTC 12132 ||| | |||||| |||| ||| ||||||| || || || |||||| || || Sbjct 7622 CTTGCTGTTTTTCAACGCCTCGCGCATGTTGTCGACATCGGTTTGCGACTGCGCCGCATC 7681 Query 12133 AGTCATGTACATGATGAAGCCTGCGTGGCTACCGTTAATGTAGTACTTCCGGCGGAACAG 12192 |||||||||| ||| ||||| ||||| ||| || ||| ||| |||||| || || Sbjct 7682 CGTCATGTACAGGATAAAGCCCGCGTGCGAACCATTCTCGTAATACCGCCGGCGAAATAG 7741 Query 12193 TGTTGCGGACTCATTCAGC-AGGGCG---GAAGGGATAGCTGACAGATATTCCGGCAGAC 12248 || || ||||| |||| | | | || | |||| || || ||||||| |||| | Sbjct 7742 CGTCGCCGACTCGTTCAACCATGCCGCGTGCAGGGC--GCCGA--GATATTCGGGCAAGC 7797 Query 12249 CGTAAATCTCCTGGTTTAAATCCGGCTCCATCAGGTGAAAGATGCTGCCTTTGGTGAACT 12308 | || | |||||| || | ||||| ||||||| |||| | | | || | ||||| Sbjct 7798 CATACACCTCCTGATTAATGTCCGGTTCCATCAAGTGATGCACGGTCCCGGCCGCGAACT 7857 Query 12309 CGTAGGGGGGCGTGGTTAGGCCGTATTGCACAAACCAGTAGGTGTCTAAATCGATCCCGC 12368 ||| | | || || |||| || | | || || | || || || ||| Sbjct 7858 CGT-GCGACGCCTGCCAC--CCGT--TGACCTGAT-AGAAGCGCTGTAGGTCCGTCGCGC 7911 Query 12369 GGCGGGTGTATTTCGCCAGTGATGGCTCCAGCGACAGAATGCCGCCGAGTCGGTTGGTGC 12428 |||| |||| || || | | |||| | || || ||||| || ||||| | | Sbjct 7912 GGCGCATGTACTTGGCTGGCGCACGCTCGAACGCAAGCGGCCCGCCTAGCCGGTTCTTTC 7971 Query 12429 GCTTCTCCAGATAGGCATTACCGAATACCAGATAGTCCTGCACAAACCGGCTGAACGCCT 12488 || ||| ||||| |||| ||||| || | || || | || |||| | | Sbjct 7972 GCAGCTCAAGATACCCATTGCCGAACGTGAGGAAATCGAGCGCCCACTTATCGAACACTT 8031 Query 12489 GCTGGCTAAGAAGTGGATGCGGGATAAAGGT-GCTGGTCAGAATGTTGCGTTTTACCGCA 12547 | | || | ||||| || || || || | | || | ||| ||||| | Sbjct 8032 CGCGCGTGAGCAACCTGTGCGGAATGAACGTCGCCGAT-AGCACGTTACGTTTGAAGTAG 8090 Query 12548 ATGGGAGAGCTGTGATGCACTGCGGCACGGTAGGTTCGCGCCAG-CCCGTCAAAGCTGAC 12606 || | |||| |||||| || |||| ||| | ||| ||||| |||| | | | || Sbjct 8091 ATCGCCGAGCCGTGATGGACGCCGGCGCGGAATGTTTTAGCCAGGCCCGACCACGAC-AC 8149 Query 12607 CGGCGGCTCATACCAGCGGTCCATCTG--CACGCATTCCACATAGTCCAGCAGCTCGCGG 12664 ||||||||| ||||| | || | | |||| ||| || ||||| || | |||| | Sbjct 8150 CGGCGGCTCGAACCAGTTG-CCGGCCGACCACGT-TTCGACGTAGTCAAGAATCTCGGCG 8207 Query 12665 CGGTCCAGCACCGGGATTGGATCACCAAAGCTGAAAGCCTCGGCAGTTACGTCTGCGTTT 12724 ||||||| || || | | || || ||| |||| |||||||| | || | |||| Sbjct 8208 CGGTCCATTACTGGCACCGCGTCGCCGAAGGTGAAGGCCTCGGCCCT--CGGCGGCGTCG 8265 Query 12725 TTAGGC--GCCATA-TCTTCTGTTGGCGTTGTGCTG-GTTAAGGCTTCGAGCTCACTCAT 12780 || ||| | || | || | | |||| | || | | | || || |||| Sbjct 8266 ACGGGGCGGCCGCAGTCGACAGTGCGGGCGGTGCGGCGTGCATGTTGCG--CTTGCTCAA 8323 Query 12781 CAAAAAATCTCCACAATGTTGCTGGTATTGGCGGATTCGCCCTGCAGCGGTTCGTTAAAC 12840 | | ||||| || | | | | ||||||| |||| | | ||||||||| Sbjct 8324 TTTGAGAACTCCATAAAGCCGGTATTGTTGGCGGTGACGCCTTCTAACGGTTCGTTGCCG 8383 Query 12841 AGTGCATGCATCGTTGCCCAGGCCAAATCTGCGTGGCTGGCCTCTTCGCTGCGGCTGGCT 12900 || || |||| |||||||| | || ||||| | | | ||| | ||||| ||| Sbjct 8384 AGCGCGTGCAGGCACGCCCAGGCAAGGTCCGCGTGTCCTGTTTGCTCGTTACGGCTCGCT 8443 Query 12901 TCATAGGTTGGACGGT--TGCCGCTGGCGGTGGTGGCGCGGCGGATAGCCATAAAGGACT 12958 ||||| || ||| | | ||||| || || ||| ||| || ||||| || || | Sbjct 8444 TCATAAGT--GACTTTCTTTCCGCTCGCCGTCATGGTTTTGCGAATCGCCATGAACGATT 8501 Query 12959 GCGCAATGTCGGTGTGCCCAGCGTCAAACTCCAGACGGCGGTGGCTGATAATGTCGT-AC 13017 |||| | ||| || || || || || || || |||| | | ||| | || | Sbjct 8502 GCGCTAAGTCTGTCCATCCGGCATCGAATTCGAGCCGGCCCTTACCGATCAC--CGACAA 8559 Query 13018 GCCTT-GAGCACCAGGGCATTTTTGACGTTAGGGTTGTAGACAAACTCCCGCACGGCAGG 13076 ||||| |||||||||| || || | || ||| | | | | || || Sbjct 8560 GCCTTTGAGCACCAGGCGGCCCTTAACTTCTGGCGAATAGTTGAGCGCGACCGCGTTCGG 8619 Query 13077 AAAGAACGCTTTTACGTTCTCATAAACACCGTGCCCGACGCCGGTCGAGTCGATGCCGAT 13136 | ||||| | ||| || ||| || || || |||| ||| |||| ||||| | || Sbjct 8620 ATAGAACTGCCTGACGAGCTGATAGACGCCCTGGCCGATGCCTGTCGTATCGATCGCCAT 8679 Query 13137 ATAGGTCACGTTGTACTGCTGCGTCAGTTTTTTGATAGCATCAGCCTGGGCG-CGAAAGT 13195 ||||| |||||||| |||||||| | || || || ||||| || ||||| | Sbjct 8680 ATAGGCGACGTTGTATTGCTGCGTGATCGCGCGTATCGCCTCGGCCTGTGCCTCGAAA-T 8738 Query 13196 CCATCCCGCGCCACTGATGACGCTCCAGAATTCGGAACTTCCCGCCAGGTACAGTTGGCG 13255 |||| |||||||| || | ||| | || ||||| || ||||| || | |||| Sbjct 8739 CCATGCCGCGCCATTGGCACTTGTGCAGCACGCGAAACTTGCCCCCAGGCACCGCCGGCG 8798 Query 13256 GTGCCATAACCACGC---AGCCTGCGCTGTCACCGTTCTGCG-TACCTTTTGCCGGGTCA 13311 |||| | | |||| |||| || |||||| || || | || |||||| Sbjct 8799 GTGCGA---CGACGCTCAAGCCGGCCGAGTCACC------CGATAGC----GCTGGGTCA 8845 Query 13312 TAACCGATCCACACTTCGCGCCAGCCAAACGGGCGCAGCGCCAGCGCCTGAAAATCGGTC 13371 || |||| ||||| ||| |||| || ||||| || ||||| Sbjct 8846 TAGCCGACCCACAGCGGGCGATAGCCGAAAGGGCGGGGC-------------AATCG--- 8889 Query 13372 CAGACTTCCCAGCTGTCCACCATGCACGCCTGCAGCTCGCTGAGCGGGAACACGGACGCG 13431 |||||||| ||| | || ||||||||| | ||||| Sbjct 8890 ------------------ACCATGCAACGCTGTAAATCCGCGAGCGGGAAAATCGACGCT 8931 Query 13432 AGATCGTCCACGAACTCACACATCAGCAGGTTCTGGTATTCGTCCGGGCTGTACTCCATG 13491 |||||| | |||| ||||||| ||| || |||||| | || |||||| || | Sbjct 8932 GTATCGTCGATAAACTGGCACATCAACAGATTGGCGTATTCCTGCGCGCTGTATTCAAGA 8991 Query 13492 CGCAGCTGGTCGAGGTCGAACAGGTTACAGCCGCCGCGCACCGCATCCTCCACGGTGACG 13551 || |||| | ||| |||||||||| || |||||| || |||||||| ||||| ||| Sbjct 8992 CGTAGCTCGCCGATATCGAACAGGTCGCACCCGCCGGCGACGGCATCCTCGACGGTCACG 9051 Query 13552 ATCTGGCGGTACTGCCCGTCAGGGCAGAGCAGGCCGCGCGCAAGGTTGCTGTGGGTCAGG 13611 |||||||| | |||| || |||||| |||||| || || || | || | | Sbjct 9052 ATCTGGCGCCATTGCCTATCCTCGCAGAGACGGCCGCCGGCGAGCGCCTTGCGCGTTACG 9111 Query 13612 TTAATATCCACCTTGTCCGCTTTGGCACGGCCCCGGTTAAACAGCGCACCGGACCAGAAC 13671 | | || || | || | || || ||||| ||||| || || | || |||||| Sbjct 9112 TCCAGATGCAGATGATCGACCTTTGCGCGGCCTCGGTTGAAGTGCTCGCCACTCCAGAAG 9171 Query 13672 GGATAAGCACTGTGGGTCAGGCTGGAGGGCGTGGAAAAATAGGTTTGTCGCCATTTTTT- 13730 | ||| || || | ||| || |||||||| |||||||||| || ||||||||| Sbjct 9172 GTATAGGCGGCATGTCCAATGCTCGACGGCGTGGAGAAATAGGTTTTTCTCCATTTTTTT 9231 Query 13731 GTGAATGGCCATACCGGAAGCCACTTTGCGCAGTTCCTGGAATTTTGGTATCCAGAAATA 13790 ||| || ||||| || || || || || ||| || | ||| |||| || || Sbjct 9232 GTGCATCGCCATGCCCGACGCGACCTTATTCAGCTCGCGAAATCCGCCAGTCCAAAAGTA 9291 Query 13791 TTCATCCAGGTACAGATTACCGTGATAGCTCTGCGCCGTGCGGGCGTTGGTGCCGAGAAA 13850 ||| || | || | ||| |||||||||||||| || ||||| ||||| ||||| ||||| Sbjct 9292 TTCGTCGAAATAGAAATTGCCGTGATAGCTCTGTGCGGTGCGCGCGTTCGTGCCTAGAAA 9351 Query 13851 GTACAAAGCGGCCCCATTGGGTAACACCATGGGATCGCCTTTCAGCTCAACATCCAC--- 13907 | || | ||| |||| || || | || || |||||| | ||||| ||||| | Sbjct 9352 GCGTAACGTCGCCTCATTCGGCAAGATGATCGGGTCGCCTGTTAGCTCGACATCGGCGGC 9411 Query 13908 CTCTTTTGCAAAGTCGATGATGTACTGCTTAAAGACGTGCGCCTGTGCCTTACTGGCAGA 13967 ||| ||||| | | ||||||||| | || |||||||| |||||||| ||||| || Sbjct 9412 CTCGCGCGCAAACTGGCAAATGTACTGCGTGAAAACGTGCGCGTGTGCCTTGCTGGCCGA 9471 Query 13968 AAGGAAAATCTGGTTGCGTCCGGTCAGCAGGGCGTCAATCAATGCTTCACGGGCAAAATA 14027 || |||||||| | ||| |||||| | ||||| || ||| || || || ||||| Sbjct 9472 CAGAAAAATCTGATCGCGGCCGGTCGTGATCGCGTCGTCCAGTGCCTCTCGTGCGAAATA 9531 Query 14028 AAACGTGGCGCCAATCTGGCGCGACTTGAGCAGGTTGCGGATGCG 14072 |||| ||||| ||||| ||||||||||| | |||||| |||| Sbjct 9532 CCACGTCGCGCCGATCTGCCGCGACTTGAGAATGTTGCGCGTGCG 9576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108962555195626