Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_020485.1 Length=34302 Score E Sequences producing significant alignments: (Bits) Value seq61051 132 1e-26 >seq61051 Length=235 Score = 132 bits (146), Expect = 1e-26 Identities = 154/202 (76%), Gaps = 7/202 (3%) Strand=Plus/Plus Query 6010 CCATTTGGTCAGAAAACACAATTTGTCGGTTGTCAAGCTTAGTAGCAAATGACCCATAGA 6069 |||| ||||||||||| ||||| | | | |||||||||| || ||||| ||||| |||| Sbjct 2 CCATCTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGACCCGTAGA 59 Query 6070 GGGCGTTAGAAAGTAGTTTAGCAATGGAGCGCTGTGTTTGGTTCTTTTCCCGATCGGCTT 6129 ||||||| || || | || || ||||||||| | ||||||| ||| | |||||||| Sbjct 60 GGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGT--TTTGCGCGATCGGCGC 117 Query 6130 TTTCCTTGGCCGCAATGTTTAATTGCACATATTCACGGGCTAAACAGTTCCAGCCTGGAA 6189 ||||||||||| ||| ||| ||||| ||||| || || | || ||| | |||| Sbjct 118 GCTCCTTGGCCGCGATG-TTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGGAA 176 Query 6190 ACACGGTGGTGCGTTCGTCGGG 6211 | |||||||||| ||| |||| Sbjct 177 A-GCGGTGGTGCGCTCG-CGGG 196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109554065296016