Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30]
69,687 sequences; 205,175,886 total letters
Query= NC_020487.1
Length=36838
Score E
Sequences producing significant alignments: (Bits) Value
seq61051 226 7e-55
>seq61051
Length=235
Score = 226 bits (250), Expect = 7e-55
Identities = 198/239 (83%), Gaps = 8/239 (3%)
Strand=Plus/Plus
Query 6737 TCCATCTGGTCAGAAAACACCGTCTTTTTATTGTCCAGCTTGGTGGCGAAGGAGCCATAG 6796
||||||||||||||||| || |||||| |||| ||||||||||| || || || |||
Sbjct 1 TCCATCTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGACCCGTAG 58
Query 6797 AGGGCGTTGGAGAGCAATTTGGCGATGGAGCGGAGCGTTTGGTTTTTGTCGCGATCGGCG 6856
||||||||||| ||||| |||||||||||||| || |||||||||| |||||||||||
Sbjct 59 AGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTTTT--GCGCGATCGGCG 116
Query 6857 CGTTCCTTGGCGGCGATGTTGAGTTGCACGTACTCGCGGGCGACACAGCGCCACTCGGGG 6916
|| |||||||| |||||||| || |||||||| ||||| || || || ||||| |||||
Sbjct 117 CGCTCCTTGGCCGCGATGTT-AGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGGA 175
Query 6917 AAGACGGTGGCCCGCTCGTCGGGTTGCAAGCGCACGCGCCAGCCGCGGTTGTGCAGGGT 6975
||| |||||| |||||| |||| || | |||||||||| ||| || ||||||||||
Sbjct 176 AAG-CGGTGGTGCGCTCG-CGGGCACCAGGTGCACGCGCCAACCGAGG-TGTGCAGGGT 231
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 117662549699200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |