Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_020487.1 Length=36838 Score E Sequences producing significant alignments: (Bits) Value seq61051 226 7e-55 >seq61051 Length=235 Score = 226 bits (250), Expect = 7e-55 Identities = 198/239 (83%), Gaps = 8/239 (3%) Strand=Plus/Plus Query 6737 TCCATCTGGTCAGAAAACACCGTCTTTTTATTGTCCAGCTTGGTGGCGAAGGAGCCATAG 6796 ||||||||||||||||| || |||||| |||| ||||||||||| || || || ||| Sbjct 1 TCCATCTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGACCCGTAG 58 Query 6797 AGGGCGTTGGAGAGCAATTTGGCGATGGAGCGGAGCGTTTGGTTTTTGTCGCGATCGGCG 6856 ||||||||||| ||||| |||||||||||||| || |||||||||| ||||||||||| Sbjct 59 AGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTTTT--GCGCGATCGGCG 116 Query 6857 CGTTCCTTGGCGGCGATGTTGAGTTGCACGTACTCGCGGGCGACACAGCGCCACTCGGGG 6916 || |||||||| |||||||| || |||||||| ||||| || || || ||||| ||||| Sbjct 117 CGCTCCTTGGCCGCGATGTT-AGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGGA 175 Query 6917 AAGACGGTGGCCCGCTCGTCGGGTTGCAAGCGCACGCGCCAGCCGCGGTTGTGCAGGGT 6975 ||| |||||| |||||| |||| || | |||||||||| ||| || |||||||||| Sbjct 176 AAG-CGGTGGTGCGCTCG-CGGGCACCAGGTGCACGCGCCAACCGAGG-TGTGCAGGGT 231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117662549699200