Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_021168.1 Length=34391 Score E Sequences producing significant alignments: (Bits) Value seq61051 208 2e-49 >seq61051 Length=235 Score = 208 bits (230), Expect = 2e-49 Identities = 194/239 (81%), Gaps = 8/239 (3%) Strand=Plus/Plus Query 5690 TCCATTTGGTCAGAAAAGACAATCTTTTTATTGTCAAGTTTGGTGGCAAACGACCCGTAG 5749 ||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct 1 TCCATCTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGACCCGTAG 58 Query 5750 AGGGCGTTAGATAGCAATTTGGCAATGGAACGTAAAGTTTGAtttttttCACGGTCGGCC 5809 |||||||| || ||||| ||||| ||||| || | ||||| |||| | || ||||| Sbjct 59 AGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTG--GTTTTGCGCGATCGGCG 116 Query 5810 CGCTCCTTGGCCGCGATGTTAAGTTGTACGTACTCCCGGGCCACGCAGCGCCACTCCGGG 5869 |||||||||||||||||||| || || ||||| || || || ||||| ||||| | |||| Sbjct 117 CGCTCCTTGGCCGCGATGTT-AGCTGCACGTATTCGCGCGCAACGCACCGCCA-TTCGGG 174 Query 5870 AAAACAGTAGTGCGCTCGTCGGGCACTATACGGACGCTCCAGCCCCTGTTGTGCAGGGT 5928 ||| | || ||||||||| ||||||| | | |||| ||| || | |||||||||| Sbjct 175 AAAGCGGTGGTGCGCTCG-CGGGCACCAGGTGCACGCGCCA-ACCGAGGTGTGCAGGGT 231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109838629614582