Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq347 136 1e-26 seq9801 96.9 1e-14 seq506 96.9 1e-14 >seq347 Length=113382 Score = 136 bits (150), Expect = 1e-26 Identities = 188/263 (71%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 302571 GTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGC 302630 ||| |||||| ||| | || | || ||||| || || ||| |||||| || ||||| Sbjct 14072 GTCCTCCATAGCCTTCACCAACCTGCGTTGAATGTATCCGGTTTCAGATGTCTTCACAGC 14013 Query 302631 TGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAG 302690 ||||||||| ||||| ||||||| ||||| || |||||||| | |||| || || Sbjct 14012 TGTATCAATCAGACCCTCACGACCTCCCATGGCGTGGAAGAAAAATTCTTGGGGAGTCAG 13953 Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750 || | || ||||| | || ||||| ||||| ||| || | |||| ||| || Sbjct 13952 ACCACGAAGGTAGGAGTTTTCCACGAACCCACGACTCTCTGGACCGTAGTCGTCCTTTGT 13893 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 ||||| || || || | |||| | ||||| || |||||||| || |||||||| || Sbjct 13892 GAAGTGAGGGAGCGTGCGCTTCTGGAATCCGTAGGGAATACGCTTACCCTCAACGTTTTG 13833 Query 302811 CTGTCCCAGGCACGAAATCATCT 302833 ||| |||| || | |||||||| Sbjct 13832 CTGGCCCACACAAGCAATCATCT 13810 >seq9801 Length=1421 Score = 96.9 bits (106), Expect = 1e-14 Identities = 119/160 (74%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 251482 GATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCG 251541 || ||||||| || ||| || || |||||||||||||| | || ||||||||| | Sbjct 1024 GACGCACCGTAGCCAACCATGCAGTCGCGCTCCATTTCACCAACGCGGAGACCACCACTG 965 Query 251542 CGAGCCCTACCCTCGGCAGGCTGACGAGTGAG-ATTAACCATAGGACCGATGGAGCGGCT 251600 |||| || |||||||| ||||| |||||||| || ||| | || ||| | |||||| Sbjct 964 CGAGACCGACCCTCGGTTGGCTGGCGAGTGAGCATCGACCGT-GGCCCGGTCGAGCGGGC 906 Query 251601 ATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAG 251640 || ||| || | ||||| ||||| || ||||||||| Sbjct 905 GTGCATCTTGTCTGTGACCATGTGCTTAAGGCGCTGGTAG 866 >seq506 Length=87288 Score = 96.9 bits (106), Expect = 1e-14 Identities = 119/163 (73%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 251482 GATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCG 251541 || || ||||| ||||||||||| || ||||||||||| |||||||| || ||||| ||| Sbjct 72343 GACGCGCCGTGCGAAATCATACAGTCGCGCTCCATTTCTCCGAAACGCAGCCCACCGTCG 72402 Query 251542 CGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTA 251601 || | ||||||||| | || || || ||||| | || ||| ||| | || Sbjct 72403 CGGGACCTACCCTCCACGGGTTGGCGCGTGAGGATCTGCACAGGCCCGCGCGCACGCGAG 72462 Query 251602 TGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATG 251644 || || |||| ||||| ||||| || ||||||||| ||| Sbjct 72463 TGGATTTTGTCATCCACCATGTGCTTTAGGCGCTGGTAGTATG 72505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1470503466038519