Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq14548 87.8 6e-13 >seq14548 Length=896 Score = 87.8 bits (96), Expect = 6e-13 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 40362 AGCGAACCGGCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCCTTCGCCCAG 40421 ||||| || || | || ||||| || || |||||| || ||||| | ||| |||||| Sbjct 895 AGCGAGCCCGCGCCCGAACCCCGGCCCGGACCGACCGGCACGCCGTTGTTCTTGGCCCAG 836 Query 40422 CGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGATGAT 40474 |||||||||||| |||| |||||||| |||||| ||||||| |||||| Sbjct 835 TTGATGAAGTCCGCAACGATCAGGAAGTAGCCCGGGAAGCCCATCTTGATGAT 783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163189643317866