Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_021343.1 Length=35430 Score E Sequences producing significant alignments: (Bits) Value seq2320 580 3e-161 >seq2320 Length=11620 Score = 580 bits (642), Expect = 3e-161 Identities = 1550/2342 (66%), Gaps = 109/2342 (5%) Strand=Plus/Plus Query 9304 ATCACATAGTCCGTGAATCGCACGATTTCCTCGCCCGCCCAATCGTTGATTTTGAGGAAT 9363 |||| |||| |||| || || | || ||||| ||| || |||| | | ||| Sbjct 7302 ATCAAATAGGGATTGAAGCGAACAACCTCGTCGCCGATCCAGTCATTGAGCTGGGCGAAC 7361 Query 9364 TGCTGTTGCAGCGGCACGATTTCGTTCCGCCCGAACACGCGCGCGGCGGTGTCGGCCGCG 9423 || ||||||| || ||||||| || |||||||| || ||||| |||||||||||| Sbjct 7362 CGCCGTTGCAGGGGTTCGATTTCATTACGCCCGAATACCTCGGCGGCCGTGTCGGCCGCG 7421 Query 9424 CCGAACCCGCCCGTGTTGCTCGGGACGATGCCAAGCAACTGCGGCGGAACGCGATGGGCC 9483 || || ||||| || |||||||| ||||| || | | |||||| || | |||||| ||| Sbjct 7422 CCAAATCCGCCGGTATTGCTCGGCACGATCCCCATGAGCTGCGGGGGGATGCGATGCGCC 7481 Query 9484 GCGAGCGTGTCGTCGCGCGTCACGTTCTTGATGTCGAAAAACTGGTCTTTCGCTGCAACC 9543 |||||| |||||||||||| || |||||||| | |||||||| ||||||||| | ||| Sbjct 7482 GCGAGCAAGTCGTCGCGCGTGACATTCTTGATATTGAAAAACTCGTCTTTCGCCGTGACC 7541 Query 9544 TCCGAAATCGGGATCAGTTGGACCGCGCCTTTTTTCGCCGCCGCTGTTTCGCGCGGCCGA 9603 || |||| || || || |||| || |||| || || ||| ||||| Sbjct 7542 TCGGAAACGGGAATGAGCTGGATACCGTCTTTCTT-------GCCGTTCGGCGCG----- 7589 Query 9604 GTGCAGAAACAGGTTCCGGAAATTACCGATGCCCTTCGAGTCGCGTAACGCCTTCCGGAT 9663 | || |||||||| |||||||| || ||||| || ||||||| || || Sbjct 7590 -TACATGAACAGGTTTCGGAAATTGCCTGGCCCCTTGCTGTTTTTCAACGCCTCGCGCAT 7648 Query 9664 CGCGTCTACGTCG-TCCGGGTCCATGTTCGGGTCGTTGAGGTACAGGATGAACCCGGCGT 9722 ||| || ||| | | | | | || || | | ||||||||| || || |||| Sbjct 7649 GTTGTCGACATCGGTTTGCGACTGCGC-CGCATCCGTCATGTACAGGATAAAGCCCGCGT 7707 Query 9723 GCGAGCCGTTCGCGTAGTAGCGGCGCCGGAACAGGGTGGCGGACTCGTTCAACCACGCGG 9782 |||| || ||| |||| || || || || || || || || |||||||||||||| || | Sbjct 7708 GCGAACCATTCTCGTAATACCGCCGGCGAAATAGCGTCGCCGACTCGTTCAACCATGCCG 7767 Query 9783 ATTGCAACGATGCGATGTACTCGGGCATCCCGTACACCTCCTGATTCACGTCCGGTTCCA 9842 |||| | ||| || ||||||| || |||||||||||||| | ||||||||||| Sbjct 7768 CGTGCAGGGCGCCGAGATATTCGGGCAAGCCATACACCTCCTGATTAATGTCCGGTTCCA 7827 Query 9843 TCAACTGGAAGATCGAGCCCGTGT-CGAACTGGTGG--CGGTTGAGAAAGCCGTCGA--T 9897 |||| || | | || |||| |||||| ||| || || | |||| || | Sbjct 7828 TCAAGTG-ATGCACGGTCCCGGCCGCGAACTCGTGCGACGCCTGCCAC--CCGTTGACCT 7884 Query 9898 GAACATGAAATTGACCAGATCCGTTTTTCGGCGCGTGTATTTCGCCGGGGAAGGG-CGAT 9956 || ||| || ||||| |||||| |||| || || || | | | ||| Sbjct 7885 GATA--GAAGCGCTGTAGGTCCGTCGCGCGGCGCATGTACTTGGCTGGCGCACGCTCGA- 7941 Query 9957 ATTGGAGTGCTCCACCTGCGCGGTTGCGCTCGC-GTTCGAGGTACGCGTCGCCGAAAACC 10015 | || | || ||| ||||| | |||| | || || ||| | | |||||| Sbjct 7942 ACGCAAGCGGCCCGCCTAGCCGGTT-CTTTCGCAGCTCAAGATACCCATTGCCGAACGTG 8000 Query 10016 AGAAAATCGAGTGCGAGGCGGCGGAACGCGTCGCGCGAAAACTTCGGATGCTCGATGAAC 10075 || |||||||| || |||| | ||||||| | | | ||| |||||| Sbjct 8001 AGGAAATCGAGCGCCCACTTATCGAACACTTCGCGCGTGAGCAACCTGTGCGGAATGAAC 8060 Query 10076 GTCGAGGCGAGCACGTTTCGTTTGAAGTACAGCGCGGACGCGTGATGCGTGCCCGCACGA 10135 |||| | |||||||| ||||||||||| | ||| || ||||||| ||| || || Sbjct 8061 GTCGCCGATAGCACGTTACGTTTGAAGTAGATCGCCGAGCCGTGATGGACGCCGGCGCGG 8120 Query 10136 AGCGATTTCGCGAGCCCGG--CGCGGCTGATCGGCGGCTCGAAATAGTCATCGATCGCCC 10193 | | ||| || || || | | || | | |||||||||||| ||| || || || Sbjct 8121 AATGTTTTAGCCAGGCCCGACCACGAC--ACCGGCGGCTCGAACCAGTTGCCGGCCGACC 8178 Query 10194 ACAGCTCGGCGTAGTCGAGAATGTCGGCGCCGTCGATTGCGGCGACCGCATCGCCGAACG 10253 || ||| ||||||| ||||| ||||||| ||| ||| | | ||||| |||||||| | Sbjct 8179 ACGTTTCGACGTAGTCAAGAATCTCGGCGCGGTCCATTACTGGCACCGCGTCGCCGAAGG 8238 Query 10254 TGAACGTTTCGATCGAGGACAGCGGCGCGCGCGTTGCAAC-GTCG----TGCGCGTCGGT 10308 |||| | ||| | | | ||| || | | || | |||| |||| | |||| Sbjct 8239 TGAAGGCCTCGGCCCTCGGCGGCGTCGACGGGGCGGCCGCAGTCGACAGTGCGGG-CGGT 8297 Query 10309 G-GTCG-GAACGAGGGCGGTGCTCATCAGTAAATCTCCA------CGGTGCTGCGTGCTC 10360 | | || | | | | |||||| | | ||||| |||| || || Sbjct 8298 GCGGCGTGCATGTTGCGCTTGCTCAATTTGAGAACTCCATAAAGCCGGTATTGTTGGC-- 8355 Query 10361 GGCTGGCACCTTCGAGGGGTTCGTTATCGAGCGCGTGAAGGCAGGCCCATGCGAGGTCAG 10420 | || | ||||| | |||||||| |||||||||| ||||| ||||| || ||||| | Sbjct 8356 -GGTGACGCCTTCTAACGGTTCGTTGCCGAGCGCGTGCAGGCACGCCCAGGCAAGGTCCG 8414 Query 10421 CGTGGCCGATTTCTTCGTTACGCGCGGCGGTGTAGGTCATCTTCGTGCCGCTCGGCGTCA 10480 |||| || ||| |||||||| || || || | ||| | ||||||| ||||| Sbjct 8415 CGTGTCCTGTTTGCTCGTTACGGCTCGCTTCATAAGTGACTTTCTTTCCGCTCGCCGTCA 8474 Query 10481 TGGCTCGGCGGATGGACAGGAACGATTGCGCGAGGTCGGTCATACCTGCGTCGAATTCCA 10540 ||| | ||| || | || |||||||||||| | ||| ||| || || |||||||| | Sbjct 8475 TGGTTTTGCGAATCGCCATGAACGATTGCGCTAAGTCTGTCCATCCGGCATCGAATTCGA 8534 Query 10541 GGCGCTTTTTCCCGATCACCGACATGCCTTTCAGGACAAGGCGGTTTTTCACTTCGGGCG 10600 | || || ||||||||||||| |||||| || || |||||| || ||||| |||| Sbjct 8535 GCCGGCCCTTACCGATCACCGACAAGCCTTTGAGCACCAGGCGGCCCTTAACTTCTGGCG 8594 Query 10601 AGTAATTGATCGGTACGACGCGCGGGAAGAACTGGCGCACAAGCTGATGCACGCCGTGAC 10660 | || |||| || || || ||| ||||||| | || ||||||| ||||| || | Sbjct 8595 AATAGTTGAGCGCGACCGCGTTCGGATAGAACTGCCTGACGAGCTGATAGACGCCCTGGC 8654 Query 10661 CGATGCCGGTCGTATCGATCGCGATATAGGTCACGTGGTAGCGCTGCGTCAATTCGCGGA 10720 ||||||| |||||||||||||| ||||||| |||| ||| ||||||| | |||| | Sbjct 8655 CGATGCCTGTCGTATCGATCGCCATATAGGCGACGTTGTATTGCTGCGTGATCGCGCGTA 8714 Query 10721 TTTTCTCCGCCTGCGTTTCGAAGTCGATGCCCTTCCAACGATGCCGTTCGAGCACACGGA 10780 | ||| ||||| | ||||| || ||||| ||| | | | ||||| || | Sbjct 8715 TCGCCTCGGCCTGTGCCTCGAAATCCATGCCGCGCCATTGGCACTTGTGCAGCACGCGAA 8774 Query 10781 ATTTTCCGTTCGGCTGCTCGGGCGGGGCGATCACGACGC---ACCCGGCCGAGTCGCCAG 10837 | || || ||| | | ||||| ||| ||||||| | ||||||||||| || | Sbjct 8775 ACTTGCCCCCAGGCACCGCCGGCGGTGCG---ACGACGCTCAAGCCGGCCGAGTCACCCG 8831 Query 10838 TAAGGGCAGGGTCGTAGCCGATCCATACCGGCTTCCAGCCGAACGGCCGATCGAGCAACG 10897 || || ||||| ||||||| ||| | ||| ||||||| || || | || Sbjct 8832 ATAGCGCTGGGTCATAGCCGACCCACAGCGGGCGATAGCCGAAAGGGCG---GGGC---- 8884 Query 10898 GCTTCACGTCCGTCCACACGTCCCATGAATCGACCATGCACGCCTGTACGAGCCG-GAAG 10956 ||||||||||||| ||||| | ||| || Sbjct 8885 ---------------------------AATCGACCATGCAACGCTGTA-AATCCGCGAGC 8916 Query 10957 GCGAACACCGATGAGGTGTCGTCCACGAACTGGCACATGTACAGGTTTTCGAAATCGGCG 11016 | ||| | ||| | || ||||| | ||||||||||| |||| || || | || Sbjct 8917 GGGAAAATCGACGCTGTATCGTCGATAAACTGGCACATCAACAGATTGGCGTATTCCTGC 8976 Query 11017 GGGCTGT-TCGTTGAGCGCAAGTCCTCCAGATC---CAGTTTCGTGAATCCGGATGCGAT 11072 | ||||| | || || | || | | ||| ||| | | | ||| |||| Sbjct 8977 GCGCTGTATTCAAGA-CGTAGCTCGCCGATATCGAACAGGT---CGCACCCGCCGGCGAC 9032 Query 11073 GGCATCCTCGGCCGTGACGATCTGCCGCCATTGCCCGTCGCCGCACTGGCGCCCGCGTGC 11132 |||||||||| | || |||||||| |||||||||| || |||| | || |||| || Sbjct 9033 GGCATCCTCGACGGTCACGATCTGGCGCCATTGCCTATCCTCGCAGAGACGGCCGCCGGC 9092 Query 11133 AAGCGACGTATGGGAAATGTCGATCTCGACGCGCTCGTCGTCGGGACGGTCGCGGTTGAA 11192 |||| | | | | | ||| | | | | ||| | | | ||| | |||||||| Sbjct 9093 GAGCGCCTTGCGCGTTACGTCCAGATGCAGATGATCGACCTTTGCGCGGCCTCGGTTGAA 9152 Query 11193 GTCCGCGCCAGTCCAAAACGCATAGGCTTCGTGCGTCGTTGTGGATGGCGTAGAGAAGT- 11251 || | ||||| |||| || | |||||| | || | | || ||||| ||||| | Sbjct 9153 GTGCTCGCCACTCCAGAAGGTATAGGCGGCATGTCCAATGCTCGACGGCGTGGAGAAATA 9212 Query 11252 GCGTCATCCGCAAATGCGAATGCGTCGCCATCCCCTTCGCTACCTTGTTCAGTTCGGCAA 11311 | | || || | ||| ||||||| ||| ||| ||||| ||||| ||| || Sbjct 9213 GGTTTTTCTCCATTTTTTTGTGCATCGCCATGCCCGACGCGACCTTATTCAGCTCGCGAA 9272 Query 11312 ACTTGCTGACCCAGAAATACTCATCGAAATACAGGTCGCCGTTGTAGCTTTGGGCCGTGC 11371 | || ||| || || || |||||||| | | ||||| ||||| || || |||| Sbjct 9273 ATCCGCCAGTCCAAAAGTATTCGTCGAAATAGAAATTGCCGTGATAGCTCTGTGCGGTGC 9332 Query 11372 GTGAACTGGTGCCGAGAAAAATCAATTCCGCACCGTTCGACAACCGCATCGGATCGCCGG 11431 | | | ||||| ||||| || ||| | |||| ||| ||||| ||||| | Sbjct 9333 GCGCGTTCGTGCCTAGAAAGCGTAACGTCGCCTCATTCGGCAAGATGATCGGGTCGCCTG 9392 Query 11432 TTAGCTCAACCTGCGCAGCGTTCCACGCAAATTTCTGG---ATATACGAGCG-GAACACG 11487 ||||||| || | || || | | |||||| |||| || ||| ||| ||| ||| Sbjct 9393 TTAGCTCGACATCGGCGGCCTCGCGCGCAAA---CTGGCAAATGTAC-TGCGTGAAAACG 9448 Query 11488 TGTGCCTGTGCGCGGCTCGCCGACAGAAAAATCTGATTCGTGCCGGTTTCCAGCGCGCGC 11547 || || ||||| ||| ||||||||||||||||||| |||||| | |||| Sbjct 9449 TGCGCGTGTGCCTTGCTGGCCGACAGAAAAATCTGATCGCGGCCGGTCGTGATCGCGTCG 9508 Query 11548 ACGAGTGCCTCGTGCGCGAAATAGAACGTGGCGCCGATCTGTCGTGACTTCAGGATGTTG 11607 | |||||||| | |||||||| |||| ||||||||||| || ||||| || |||||| Sbjct 9509 TCCAGTGCCTCTCGTGCGAAATACCACGTCGCGCCGATCTGCCGCGACTTGAGAATGTTG 9568 Query 11608 CG 11609 || Sbjct 9569 CG 9570 Score = 98.7 bits (108), Expect = 2e-16 Identities = 236/353 (67%), Gaps = 8/353 (2%) Strand=Plus/Plus Query 31321 CGAGTCACGCGCCG--ACGAAGCGGATTCGCTCAATCTCGTGTTGGACGACGCGCGCGGC 31378 |||||| |||| || ||||||| || |||| || |||| | | || || |||| Sbjct 9686 CGAGTCGCGCGGCGCGACGAAGCCGACATGCTCGATATCGTCGTCAATGATGCAGACGGC 9745 Query 31379 GATCTGGAATTGCCGAAGCGCGGCGCCGAACTGAAGCTGTCGATCGGGTGGGAGGGCGAA 31438 || | | || |||||||||||| ||| ||||| |||| ||| ||| Sbjct 9746 CGGCTTGCGATCCCCGAGCGCGGCGCCGTGCTGCGCGTGTCGTTCGGCTGGTC---CGAT 9802 Query 31439 AC--GC-TCGTGGACAAAGGCACGTTCACGATCGATGAATTCGAGTTCCACGGCGCACCC 31495 || || |||| ||||| ||| | || || |||| || | ||| | ||||| | Sbjct 9803 ACCGGCGTCGTCGACAAGGGCGCCTTTACCGTCGACGAGGTAGAGCACAGCGGCGGCGCG 9862 Query 31496 GATCAGATCACGATCAGCGCGCGTTCGGCGTCGATGACGGATGCCATGCACGAGCGGCGC 31555 ||| |||| || | ||||| ||||| |||||||| | | |||| |||| || Sbjct 9863 GATATCCTCACCATTCGGGCGCGCTCGGCCTCGATGACCAAGGACATGGACGAACGAAAG 9922 Query 31556 GACAAAAGCTGGCACGGCCAGACGATCGGCGATATCGTCAAGACGATCGCCGTTCGGCAC 31615 || |||||||||||| | ||| ||||| ||||| | |||||||| |||||| Sbjct 9923 GAGGCGAGCTGGCACGGCGAAACGCTCGGCCCGATCGTGCGCAAGATCGCCGGCCGGCAC 9982 Query 31616 AAGTTGACACCCGCGCTCGGCGACGCGCTCGCCAAGGTCAGGATCGCGCATAT 31668 | | | || ||| ||| |||||| ||||| || || |||||||||||| Sbjct 9983 AGCCTCAAGCCGGCGATCGCCGACGCCCTCGCGAAAATCGCGATCGCGCATAT 10035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113160678232448