Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30]
69,687 sequences; 205,175,886 total letters
Query= NC_021857.1
Length=41475
Score E
Sequences producing significant alignments: (Bits) Value
seq2388 84.2 6e-12
>seq2388
Length=11216
Score = 84.2 bits (92), Expect = 6e-12
Identities = 178/262 (68%), Gaps = 8/262 (3%)
Strand=Plus/Plus
Query 23576 GCCTATATAAGTCCATACGCGAAGAGGAAAGGTTGAAAAACTTGTGATACCTTCCAGTGC 23635
||| | |||||||||||||||||| || | || ||||| |||| || ||||| ||
Sbjct 6017 GCCAACATAAGTCCATACGCGAAGTGGCAGCGTGCTGAAACTCGTGAAGCCCTCCAGCGC 6076
Query 23636 CAGATTCCATAATTTCCAGCCATTAAATTTTGAGATGCCAGCAACACGCTCTGCGCGTAC 23695
| ||||| | |||||| || ||| || || |||| || | ||| | |||| ||
Sbjct 6077 GAAGTTCCACAGTTTCCACCCGGAAAACTTCGACCTGCCGGCGAGGCGCGGTTCGCGCAC 6136
Query 23696 ATATTCCACGACATCCGTCTGACCACCCACCCAGCTCAGTATGCCTTTCATGAAAAGATT 23755
|||||| ||||| | ||| | || |||||| | | ||||||||||| |
Sbjct 6137 ATATTCGACGACGGCGGTCCGGTACCCGACCCAGGCGAACAGACCTTTCATGAAGCG--- 6193
Query 23756 GCGC---TCAGGCAACAGTTTAATGTTC-TCCACAACCTCACGAGACATGAGTCGAAAAT 23811
|||| || || | | |||| | || | ||||| |||||||| | || | || || |
Sbjct 6194 GCGCGTTTCGGGAAGCTGTTTGA-GTGCGTCCACGACCTCACGTGTAATCAAGCGGAAGT 6252
Query 23812 CTCCGACATTTTCCTCGATCTT 23833
| || || |||||| |||||
Sbjct 6253 CGCCCACGTTTTCCGGAATCTT 6274
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132488670431678
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |