Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_022067.1 Length=109960 Score E Sequences producing significant alignments: (Bits) Value seq5875 104 2e-17 >seq5875 Length=3462 Score = 104 bits (114), Expect = 2e-17 Identities = 125/166 (75%), Gaps = 7/166 (4%) Strand=Plus/Minus Query 95684 TTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATG 95743 ||||| ||||| |||| || ||||| ||||| ||||| ||||| || | || || ||| Sbjct 242 TTGATGAGGCCGGTGATGACGTCCACCGAGGGTCGCTGGGTCGCGAGAATCAGGTGGATG 183 Query 95744 CCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTTGTAG 95803 ||||| |||||||| ||||| |||| || | || | |||| |||| |||| Sbjct 182 CCGGCGGCGCGCGCTTTCTGTGCGAGACGCGCGATCAATTCTTCGA--TCTT-CTTGC-- 128 Query 95804 CCGCC--CATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGAT 95847 ||||| |||||||||||| || || ||||||| ||| |||||||| Sbjct 127 CCGCCACCATCATGAGGTCGGCGAGTTCGTCGATCACGACCACGAT 82 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351448457475647