Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq26606 203 5e-46 seq11685 138 2e-26 seq7481 118 2e-20 seq1429 105 1e-16 seq359 104 4e-16 seq3334 102 1e-15 seq9495 100 4e-15 seq513 95.1 2e-13 seq11 93.3 7e-13 seq6447 89.7 8e-12 seq1032 87.8 3e-11 >seq26606 Length=519 Score = 203 bits (224), Expect = 5e-46 Identities = 186/235 (79%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||||||||| || ||||| |||||||||||| |||| || || ||| | | Sbjct 191 TGTACTTGGTGACGGCCTTTGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCTCCGGGAA 250 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 |||||| || |||||||||||||| ||||| | ||||||| ||||||||| | Sbjct 251 GGATCAGTCGGACGGCGGTCTGGATTTCGCGAGACGAGATCGTGGAGCGCTTGTTGTAGT 310 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||||||| || ||||| | ||||||| |||| | ||| ||||| |||||||||| Sbjct 311 GCGCCAGACGAGATGCCTCAGCAGCGATGCGCTCGAAGACGTCATTGACGAACGAGTTCA 370 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||| ||||||| ||| ||||| || |||||||||||||||||||||||| Sbjct 371 TGATGGACATCGCTTTCGAGGAGACACCAGTGTCGGGGTGCACCTGCTTGAGCAC 425 >seq11685 Length=1128 Score = 138 bits (152), Expect = 2e-26 Identities = 190/266 (71%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| || || | || || |||||||||| || || ||||| || |||||| Sbjct 826 GCCTCTGGCACCTTCACGTCGCTCATGAAGCGCTGCGCGAGATTCTCGATGACTATGCCG 767 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 |||||| ||||||| |||||||| || |||||||| ||||| ||||| ||||| | ||| Sbjct 766 TCGCTGCCGGCGAAGAAGGCGAGCACATGCTTGATGAAGTGCCGCTCCCCGTCGTTCAGC 707 Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329 | |||||| | ||||| ||| ||||||| ||||||| | ||||| | | || | Sbjct 706 GTTGCCCAGTCCTTCATGTCGTTGCCCAGGTCGATCTCCTCGACCGTCCAGATGCAGCTC 647 Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGCGA 796389 || || |||||| | ||| || ||||| |||| ||||| ||||| |||| Sbjct 646 TCCTGCTCCTTGTACTTGCGCCAGATGTCATGGTACTGGATTGGGAAGAGAACGTAGCGG 587 Query 796390 TTGGGGTTCTCGCGTAGCAGCGGCTC 796415 |||||||| | |||||||||| Sbjct 586 AACGGGTTCTCCTGCTGCAGCGGCTC 561 >seq7481 Length=2307 Score = 118 bits (130), Expect = 2e-20 Identities = 229/333 (69%), Gaps = 9/333 (3%) Strand=Plus/Minus Query 2175071 CACGCTGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTC 2175130 ||||| ||||||||||||||| || || |||| ||| ||| || |||| || | | Sbjct 1082 CACGCCGCCGTCGGTGCCGTTCTTGAAGCCGATCGGGCACGAAAGGCCCGAGGCGAGCTG 1023 Query 2175131 GCGGTGCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCCCCACGCCACGAGGTCTGC 2175190 ||||| |||||| ||||| ||||||||||| | |||||||||||||||||||| || Sbjct 1022 CCGGTGGCTCTGGCTTTCGGTCGTGCGCGCGCCGATCGCGCCCCACGCCACGAGGTCGGC 963 Query 2175191 CA--AATAGGGCGC-CACCAAAGGGCTGAGAAACTCGACAGCCACGGGCTGGCCGACGTC 2175247 | ||| | | || || || | ||| || || ||| |||| |||||| | Sbjct 962 AATGAATTGCGGGCTCAGCA---GATCGAGGAATTCCGTGGCCGTGGGCAGGCCGA--GC 908 Query 2175248 GACGACCAGGTCGCGCAGCAGTCGACGCGATGTGGCGAGGCCGGCGGCCAGGCGGCACGA 2175307 | || | |||| ||||||| | |||| | | ||||| || | |||| | Sbjct 907 G-CGTTGATGTCGAGCAGCAGCTGGCGCGCGGCGCGCAGGCCCTCGTTGATGCGGAAGCT 849 Query 2175308 CCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTC 2175367 ||||| || |||||| || ||||||||| || || || || |||||||| || Sbjct 848 GCCGTCCAGACGCGGGTCGTTGATATAGCCCTTCCAGCCCACCGTGGTTCGCGGCTTCTC 789 Query 2175368 GACATAGGCGCGCATGACCACCAGGAGAGCGTC 2175400 || || |||||||||| | ||| || |||| Sbjct 788 GAAGTACACGCGCATGACGATCAGCAGGTCGTC 756 >seq1429 Length=23345 Score = 105 bits (116), Expect = 1e-16 Identities = 225/330 (68%), Gaps = 12/330 (4%) Strand=Plus/Plus Query 793893 ACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGC 793952 || || | ||| ||||||||| ||| || | |||||||||||| ||||| | | | Sbjct 7779 ACTCCGGTCTTTGCATACTCGGACACACGGCTCTCGAAAAAGTTCGTCTTTCTGGACAAC 7838 Query 793953 GAGATCAACTCCATCCACGGGAACGGGTTG--GCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 ||||| | |||||||| ||| ||||| | ||| |||| ||| | ||| | Sbjct 7839 GAGATGAGTTCCATCCAGTCGAATGGGTTTTTGGCGTT--GTAGACCTTGGGGTGCCCAA 7896 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 ||| | | || || || ||||||||||| ||||| |||| |||| ||||||||| Sbjct 7897 GCGCCAGTAAAAGTCGATCAGCGACGAATTCGATGTATTGGCTCATGGCTTCGGCGTTCA 7956 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 | || || || || || || || | ||| ||| |||||||||||| | | || || | Sbjct 7957 TTCCAATCAGGGCGACCGGTAGGGCCTCTGTGATAAACTCTTTCTCTACGGCTACCGCAT 8016 Query 794131 C---GATGAT-GATCTGCCTGGGCACGTCGGACGACGGCTTGTCGACGAGCATCGTGTAG 794186 | ||| || ||| | | || | || | | | |||| | |||||| | ||| Sbjct 8017 CATAGATAATCGATTT---TAGGGTC-TCTGGTTTCAGTTTGTTGGAGAGCATAGAGTAA 8072 Query 794187 AGCAGGCAGGCAAAGTCGCAATGCAGACCT 794216 || ||||| || |||||||| || |||||| Sbjct 8073 AGGAGGCAAGCGAAGTCGCAGTGGAGACCT 8102 >seq359 Length=109469 Score = 104 bits (114), Expect = 4e-16 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || || ||||| | |||||||| |||||| | || | |||||||||||||||||| Sbjct 1906 GCTGCTAACTATTTGGACATCAAACCCCTCTTGGACGTAACTTGCAAGACCGTGGCCAAC 1847 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | |||||||||||| | || ||||| |||||||||||||| ||||| ||| ||| Sbjct 1846 ATGATCAAGGGCAAGACACCAGAGGAAATCCGCAAGACCTTCAACATTAAGAACG 1792 >seq3334 Length=7651 Score = 102 bits (112), Expect = 1e-15 Identities = 136/188 (72%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 1988600 GTCACGATGCCGAAATTGCCGCCGCCGGCCCCGCGCAGCGCCCAAAAGAGGTCGGCGTTG 1988659 ||||| | |||||| |||||||||||| ||||| |||||||| |||||||||||||| Sbjct 3466 GTCACCACGCCGAAGTTGCCGCCGCCG---CCGCGAAGCGCCCAGAAGAGGTCGGCGTT- 3521 Query 1988660 GGGCCGCCGGCGTCGGCGCGCACGAGGCGACCGTCGGCGAGGACGACCTCGGCCGCCACG 1988719 | | ||| ||||||| || ||||||||| ||||| ||||| || ||| Sbjct 3522 --TTCTTCCGCGCTCGCGCGCAGCAGATTGCCGTCGGCGGTCACGACGTCGGCGGCGACG 3579 Query 1988720 AGATTGTCGCAGGTGAGACCCCAACGGCGCATCAGAAACCCGACGCCGCCGCCCTGGGTG 1988779 || |||||| | | || | || || |||| | |||| |||||||||| | ||| Sbjct 3580 AGGTTGTCGACCGACATGCCGAAGCGCCGGCTCAGCCAGCCGAAGCCGCCGCCCAGCGTG 3639 Query 1988780 AGGCCGGC 1988787 || ||||| Sbjct 3640 AGACCGGC 3647 >seq9495 Length=1495 Score = 100 bits (110), Expect = 4e-15 Identities = 141/193 (73%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 652894 CGAGGTGCACCCGCTGCTCATGCTGGGCGCCTGCGCTTCCATCATCCCCTTTTCCAACCA 652953 |||| || ||||| | | || || ||| ||||| ||||| ||||| | ||||||| Sbjct 1474 CGAGATGGACCCGTCGATGATTCTCGGCATTTGCGCCTCCATTATCCCGTACCCCAACCA 1415 Query 652954 CAACCAGGCGCCGCGCAACATCTACCAGACGGCCATGGGCAAGCAGAGCAAGGCCGTCGT 653013 ||||||| | |||||||||| ||||||| | |||||||| |||||| || || | || | Sbjct 1414 CAACCAGTCCCCGCGCAACACCTACCAGTCCGCCATGGGTAAGCAGGCCATGGGCATC-T 1356 Query 653014 GTCGCTC-AACGCCGATCACGC-CATCGACACCGTGTCGCACGCCCTCTGCTACCCGCAG 653071 ||| ||| | | || || ||| |||||| | |||| ||||| ||||||||| Sbjct 1355 ACGCCTCGAACTTC-AACATGCGCATGGACACCACCGCCCACGTCCTCTTCTACCCGCAA 1297 Query 653072 GTGCCGCTGGTGC 653084 |||||||||| Sbjct 1296 AAACCGCTGGTGC 1284 >seq513 Length=89456 Score = 95.1 bits (104), Expect = 2e-13 Identities = 146/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 429510 CTCCAGATCGGGTGGACCGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATG--- 429566 ||| || |||| | | |||||||| ||||||| |||||| | ||||||| Sbjct 46144 CTCGAGTTCGGATACAAGGTCGAGCGGCACCTGCAGGACGGCGATC---TGGTCATTTTC 46088 Query 429567 AACCGGCAGCCGTCGCTCCACATGGGGTCGATGCTCAACCACAAGGTGGTGCCCATGCCC 429626 ||||| ||||| |||||||||| ||| ||| | |||| | |||||| Sbjct 46087 AACCGCCAGCCCTCGCTCCACAAAATGTCCATGATGGGCCACCGAATCCGAATCATGCCG 46028 Query 429627 GGTCGCACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGC 429686 ||||||||| ||||||||| |||||||| | | ||||| || || || || || Sbjct 46027 TACTCCACCTTCCGTCTCAACCTGTCCGTGACGACCCCTTACAATGCGGATTTCGATGGT 45968 Query 429687 GACGAGATGAACCTGCACGTGCCCCAG 429713 ||||| |||||| |||||||||||||| Sbjct 45967 GACGAAATGAACATGCACGTGCCCCAG 45941 >seq11 Length=383883 Score = 93.3 bits (102), Expect = 7e-13 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| ||||||||||| ||||| || || |||||| |||| || || || | | Sbjct 311732 TGTACTTGGTCACGGCCTTGGTTCCCTCAGACACAGCGTGCTTGGCGAGCTCTCCTGGGA 311791 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||| |||||||| ||||||||||| || | || ||| |||| |||||| | Sbjct 311792 GGATGAGGCGCACAGCGGTCTGGATTTCTCTGGAAGAGATGGTGTGCTTCTTGTTGTATC 311851 Query 1485590 GCGCCAGGCGGCCGGCCTC 1485608 |||||||| ||||| || Sbjct 311852 TGGCCAGGCGACCGGCTTC 311870 >seq6447 Length=2993 Score = 89.7 bits (98), Expect = 8e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 2233082 GGCGAGTTGGTCGCCTTTCCCACCGAGACCGTCTATGGCCTCGGCGCCGACGCGGCGTCA 2233141 ||||| |||||||||| || |||||||||||||| || || |||| ||| |||||| Sbjct 2031 GGCGAACTGGTCGCCTTCCCGACCGAGACCGTCTACGGTCTGGGCGGCGATGCGGCGAGC 2090 Query 2233142 GACGAGGCCGTACAGCGCATCTTTGACGCCAAGGGCCGACCGTCCAACAACCCGATCATC 2233201 || ||| || |||||||| || ||||| || || ||| | ||| | ||| | ||| Sbjct 2091 CCCGCGGCGGTCGCGCGCATCTATGCGGCCAAAGGACGGCCGGCGAACCATCCGGTGATC 2150 Query 2233202 GTGCACGTG 2233210 |||||| || Sbjct 2151 GTGCACTTG 2159 >seq1032 Length=39508 Score = 87.8 bits (96), Expect = 3e-11 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||| ||||| |||||||||||||| || || |||||| |||| || || || | | Sbjct 8985 TGTACTTCGTGACTGCCTTGGTACCCTCAGACACAGCGTGCTTGGCAAGCTCACCAGGAA 8926 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTC 1485557 |||||||||||| || |||||||| || Sbjct 8925 GGATCAGGCGCACTGCCGTCTGGATTTC 8898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7908833475967593