Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_022266.1 Length=31967 Score E Sequences producing significant alignments: (Bits) Value seq61051 271 2e-68 >seq61051 Length=235 Score = 271 bits (300), Expect = 2e-68 Identities = 209/241 (87%), Gaps = 8/241 (3%) Strand=Plus/Plus Query 6235 TCCATCTGGTCAGAAAAGACGATCTTTTTGTTGTCCAGCTTGGTGGCGAACGACCCGTAG 6294 |||||||||||||||||||| ||||||| |||| ||||||||||| |||||||||||| Sbjct 1 TCCATCTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGACCCGTAG 58 Query 6295 AGGGCGTTGGAGAGCAGCTTGGCGATGGAGCGCAGGGTCTGGTTCTTCTCGCGGTCGGCG 6354 ||||||||||| |||| ||||||||||||||||||||| |||| || |||| |||||| Sbjct 59 AGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGT--TTTGCGCGATCGGCG 116 Query 6355 CGCTCCTTGGCGGCGATGTTGAGCTGGACGTACTCGCGGGCCACGCAGCGCCATTCGGGG 6414 ||||||||||| |||||||| ||||| ||||| ||||| || ||||| ||||||||||| Sbjct 117 CGCTCCTTGGCCGCGATGTT-AGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGGA 175 Query 6415 AAGACGGTGGCGCGCTCGTCCGGCAGGAGGCGCACGCGCCAGCCGCGGTTGTGCAGGGTG 6474 ||| |||||| ||||||| | |||| ||| |||||||||| ||| || ||||||||||| Sbjct 176 AAG-CGGTGGTGCGCTCG-CGGGCACCAGGTGCACGCGCCAACCGAGG-TGTGCAGGGTG 232 Query 6475 A 6475 | Sbjct 233 A 233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 102088248623526