Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_022976.1 Length=75894 Score E Sequences producing significant alignments: (Bits) Value seq5777 269 1e-67 >seq5777 Length=3561 Score = 269 bits (298), Expect = 1e-67 Identities = 499/727 (69%), Gaps = 19/727 (3%) Strand=Plus/Plus Query 66092 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 66151 ||||||| || ||| || ||| ||| || ||| | || || | ||| | ||||||| Sbjct 837 CCACCGGTTCGCTCGGCCTCGACATCGCACTCGGCGTGGGCGGTTTGCCGCGTGGCCGGG 896 Query 66152 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGG 66211 |||| || |||||||| || ||||| || || ||| | || || || || | | | | Sbjct 897 TGGTCGAGATCTACGGTCCGGAATCGTCGGGCAAGACCACGCTCACGCTGCAGGTGATCG 956 Query 66212 CCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACC 66271 || | ||||||| ||| |||| || || | ||||||||| || ||| | || ||| Sbjct 957 CCGAAATGCAGAAGCTCGGCGGCACGGCGGCGTTCATCGACGCGGAACACGCGCTCGACG 1016 Query 66272 CCGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACA 66331 | |||||| |||||| ||| || | | | || | | |||||||||| Sbjct 1017 TGCAATACGCCGCCAAGCTCGGCGTGAACGTGCCCGAACTGCTCATCTCGCAGCCGGACA 1076 Query 66332 CTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCG 66391 | ||||||||||| || || ||| ||| || || || ||| | | ||| Sbjct 1077 CGGGCGAGCAGGCGCTCGAAATCACCGACGCGCTGGTGCGCTCGGGCTCGATCGACATGA 1136 Query 66392 TCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGG 66451 |||| | ||||| || ||||| || |||||| ||||| ||||||| || || || | Sbjct 1137 TCGTGATCGACTCGGTCGCGGCGCTCGTGCCGAAGGCCGAAATCGAAGGTGAAATGGGCG 1196 Query 66452 ACAGTCACGTC--GGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGG 66509 || || | | || ||||| |||||||| ||||||||||| |||||||||||||||| Sbjct 1197 AC--TCGCTGCCGGGTCTGCAGGCGCGCCTGATGTCGCAGGCGCTGCGCAAGCTCACCGG 1254 Query 66510 CACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGG 66569 ||| ||| | || ||| || | ||| |||||||| | ||| ||||||||| Sbjct 1255 CACGATCAAGAAGACGAACTGCATGGTGATCTTCATCAACCAGATCCGCATGAAGATCGG 1314 Query 66570 CAACGTGGGCTACGGC---CCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTA 66626 |||| | |||| ||| || |||||||||||||| || || | | |||||| Sbjct 1315 ---CGTGATGTTCGGCAATCCG---GAAACCACCACGGGCGGCAACGCGCTCAAGTTCTA 1368 Query 66627 CGCCTCAGTCCGCATGGATGTCCGTCGCATCG---CCACCGAGAAGGAAGGCGATGAGGC 66683 | | || || || |||| | || ||||||| | | | ||||| | ||| || | Sbjct 1369 CTCGTCGGTGCGTCTGGACATTCGCCGCATCGGTTCGATCAAGAAGAA---CGACGAAGT 1425 Query 66684 TGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAA 66743 |||||| | || || ||||| ||||| ||||||||| | | |||||| |||| | Sbjct 1426 GATCGGCAGCGAAACGCGTGTGAAGGTCGTGAAGAACAAGGTTTCGCCGCCGTTCCGCGA 1485 Query 66744 CGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCT 66803 |||| |||| | | | ||||| ||||||||||||||| ||| |||| || ||||||| Sbjct 1486 AGCCGTGTTCGACATTCTCTACGGCGAGGGCATCTCGCGTCAGGGCGAAATCGTCGACCT 1545 Query 66804 GGCCGTG 66810 | |||| Sbjct 1546 CGGCGTG 1552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242529841811985