Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_022988.1 Length=74210 Score E Sequences producing significant alignments: (Bits) Value seq5777 279 2e-70 >seq5777 Length=3561 Score = 279 bits (308), Expect = 2e-70 Identities = 501/727 (69%), Gaps = 19/727 (3%) Strand=Plus/Plus Query 64681 CCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGG 64740 ||||||| || ||| || ||| ||| || ||| | || || | ||| | ||||||| Sbjct 837 CCACCGGTTCGCTCGGCCTCGACATCGCACTCGGCGTGGGCGGTTTGCCGCGTGGCCGGG 896 Query 64741 TGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGG 64800 |||| || |||||||| || ||||| || || ||| | || || || || | | | | Sbjct 897 TGGTCGAGATCTACGGTCCGGAATCGTCGGGCAAGACCACGCTCACGCTGCAGGTGATCG 956 Query 64801 CCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACC 64860 || | ||||||| ||| |||| || || | ||||||||| || ||| | || ||| Sbjct 957 CCGAAATGCAGAAGCTCGGCGGCACGGCGGCGTTCATCGACGCGGAACACGCGCTCGACG 1016 Query 64861 CTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACA 64920 | |||||| |||||| ||| || | | | || | | |||||||||| Sbjct 1017 TGCAATACGCCGCCAAGCTCGGCGTGAACGTGCCCGAACTGCTCATCTCGCAGCCGGACA 1076 Query 64921 CTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCG 64980 | ||||||||||| || || ||| ||| || || || ||| | | ||| Sbjct 1077 CGGGCGAGCAGGCGCTCGAAATCACCGACGCGCTGGTGCGCTCGGGCTCGATCGACATGA 1136 Query 64981 TCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGG 65040 |||| | ||||| || ||||| || |||||| ||||| ||||||| || || || | Sbjct 1137 TCGTGATCGACTCGGTCGCGGCGCTCGTGCCGAAGGCCGAAATCGAAGGTGAAATGGGCG 1196 Query 65041 ACAGTCACGTC--GGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGG 65098 || || | | || ||||| |||||||| ||||||||||| |||||||||||||||| Sbjct 1197 AC--TCGCTGCCGGGTCTGCAGGCGCGCCTGATGTCGCAGGCGCTGCGCAAGCTCACCGG 1254 Query 65099 CACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGG 65158 ||| ||| | || ||| || | ||| |||||||| | ||| ||||||||| Sbjct 1255 CACGATCAAGAAGACGAACTGCATGGTGATCTTCATCAACCAGATCCGCATGAAGATCGG 1314 Query 65159 CAACGTGGGCTACGGCCCGAAT---GAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTA 65215 | ||| | |||| ||| || ||||||||||||||||| || | | |||||| Sbjct 1315 C---GTGATGTTCGGC---AATCCGGAAACCACCACGGGCGGCAACGCGCTCAAGTTCTA 1368 Query 65216 CGCCTCAGTCCGCATGGATGTCCGTCGCATCG---CCACCGAGAAGGAAGGCGATGAGGC 65272 | | || || || |||| | || ||||||| | | | ||||| | | ||| | | Sbjct 1369 CTCGTCGGTGCGTCTGGACATTCGCCGCATCGGTTCGATCAAGAAGAACGACGAAGTGA- 1427 Query 65273 TGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAA 65332 |||||| | || || ||||||||||| ||||||||| | | |||||| |||| | Sbjct 1428 --TCGGCAGCGAAACGCGTGTGAAGGTCGTGAAGAACAAGGTTTCGCCGCCGTTCCGCGA 1485 Query 65333 CGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCT 65392 |||| |||| | | | ||||| ||||||||||||||| ||| |||| || ||||||| Sbjct 1486 AGCCGTGTTCGACATTCTCTACGGCGAGGGCATCTCGCGTCAGGGCGAAATCGTCGACCT 1545 Query 65393 GGCCGTG 65399 | |||| Sbjct 1546 CGGCGTG 1552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 237145618575397