Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_023688.1 Length=222006 Score E Sequences producing significant alignments: (Bits) Value seq31770 93.3 6e-14 seq23474 93.3 6e-14 seq2065 84.2 3e-11 >seq31770 Length=444 Score = 93.3 bits (102), Expect = 6e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 97399 CTGGTAGCCATGGGCAGGATTGAACTGCCGACCCCACCCTTATCAGGGGTGTGCTCTACC 97458 ||||| ||||||||||||| |||||||||||| | |||||| || ||| |||||||||| Sbjct 48 CTGGTGCCCATGGGCAGGATCGAACTGCCGACCTCTCCCTTACCAAGGGAGTGCTCTACC 107 Query 97459 ACTGAGCTACATGG 97472 ||||||| |||||| Sbjct 108 ACTGAGCCACATGG 121 >seq23474 Length=584 Score = 93.3 bits (102), Expect = 6e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 97399 CTGGTAGCCATGGGCAGGATTGAACTGCCGACCCCACCCTTATCAGGGGTGTGCTCTACC 97458 ||||| ||||||||||||| |||||||||||| | |||||| || ||| |||||||||| Sbjct 96 CTGGTGCCCATGGGCAGGATCGAACTGCCGACCTCTCCCTTACCAAGGGAGTGCTCTACC 155 Query 97459 ACTGAGCTACATGG 97472 ||||||| |||||| Sbjct 156 ACTGAGCCACATGG 169 >seq2065 Length=13171 Score = 84.2 bits (92), Expect = 3e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 94135 ATAGGATTTGAACCTATGACCCTCTGATCCCAAACCAGATGCGCTACCGGACTGCGCTA 94193 |||||||| ||||||| ||||||||||||||||| ||||||||||||| | |||||||| Sbjct 12357 ATAGGATTCGAACCTACGACCCTCTGATCCCAAATCAGATGCGCTACCAGGCTGCGCTA 12415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709672474214320