Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq6776 100 2e-16 seq66879 89.7 3e-13 seq146 89.7 3e-13 >seq6776 Length=2740 Score = 100 bits (110), Expect = 2e-16 Identities = 158/223 (71%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| || || ||| ||| || || |||||||| || ||||| ||||| | || || Sbjct 1422 CACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCCTCCTC 1363 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 || || || ||||| || |||| |||||||| || |||| | || || ||||| Sbjct 1362 CAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 1303 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || || |||| ||| || | |||||||| | ||||| || | || |||||| | Sbjct 1302 GATCTTGGCCTTCA-CATTCTCGATCGTGTCGCTCGGCTCCACCTCCAGCGCGATCGTCT 1244 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCATAGT--TGGTGTG 33759 | || || | ||| || || ||||||||||| || ||||||| Sbjct 1243 TGCCGGTCAGCGTCTTCACGAAGATCTGCATGGTGGTGGTGTG 1201 >seq66879 Length=210 Score = 89.7 bits (98), Expect = 3e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| |||||||| || | || | || || |||||||| ||||| |||||||| ||| Sbjct 66 ACCTCCTCTCAAGCGGAGGACAAGGTGCAGTGTGCTCTCCTTTTGGATGTTGTAGTCGCT 125 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||||| | || ||||| || ||||| || || ||||||||||| || || | || Sbjct 126 CAAAGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCAGGGGG 185 Query 33642 CACACCTTCTTTGTCGGCAATTTT 33665 | ||||||||||| |||||| Sbjct 186 GATTCCTTCTTTGTCCTGAATTTT 209 >seq146 Length=178297 Score = 89.7 bits (98), Expect = 3e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 |||||| || || ||| ||| ||||| |||||||| |||||||| |||||| | || || Sbjct 157056 CACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGTCCATCCTC 157115 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC 33656 | ||| || || |||||||||||||| || || || | || | ||||| ||||| Sbjct 157116 GAGTTGCTTGCCAGCAAAAATCAAACGTTGTTGGTCGGGGGGGATTCCTTCCTTGTC 157172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328424828303040