Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq4462 89.7 1e-13 >seq4462 Length=5303 Score = 89.7 bits (98), Expect = 1e-13 Identities = 185/273 (68%), Gaps = 2/273 (1%) Strand=Plus/Plus Query 233 ACGATTTCAGTTGTGTAGCGATCAACGCCAGCCTGGTCCTGCCACTTGCGCGTTTGCA-G 291 |||||||| || | |||||| || ||| |||| | ||||| |||||||| | | | Sbjct 4796 ACGATTTCCGTCGAGTAGCGGTCGGTGCCGTCCTGCGCTTGCCATTTGCGCGTGCGGATG 4855 Query 292 CGCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTACTGGCTGGCGATTTCTGCCAG 351 || |||||| || ||||| || || |||||||| | |||| || ||||| Sbjct 4856 CG-GCCTTCGATATACACCGACGAACCCTTCTTCAGGTACTCCGAGACGATCTCGGCCAG 4914 Query 352 CTTTCCGAAGATGACCACGCGGTGCCATTCCGTTTTTTCTTTCTTCTCCCCTGTCTGCTT 411 ||||||| ||||||||||||||| || |||| || ||| || | | ||| Sbjct 4915 GCGCCCGAAGAACGACACGCGGTGCCATTCGGTCATTTCCTTGAACTCGCCGGACGCCTT 4974 Query 412 ATCCTTCCAGGTTTCAGACGTGGCAATTGATAACTGCGCCACGCCGTTGCCGTTCGGCAG 471 ||||| || || | |||||| | | | ||||||| ||| |||| ||||||| Sbjct 4975 GTCCTTGTAGCGGTCGGTCGTGGCGAGGCGAATGTTCGCCACGGCGTCGCCGCTCGGCAG 5034 Query 472 CGTGCGGAATTCTGGATCGTTGCCTAAGTTGCC 504 ||| | ||| |||||| ||| | |||||| Sbjct 5035 ATAGCGCACTTCCGGATCGGCGCCGAGGTTGCC 5067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135289550690822