Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_025678.1 Length=32661 Score E Sequences producing significant alignments: (Bits) Value seq61051 107 4e-19 >seq61051 Length=235 Score = 107 bits (118), Expect = 4e-19 Identities = 149/203 (73%), Gaps = 7/203 (3%) Strand=Plus/Plus Query 6035 TCCAATTGGTCAGAAAATACAACTTTTTTAGTGTCAAGTTTCGTGGCGAAAGACCCGTAT 6094 |||| ||||||||||| |||| | ||| |||||||| || ||||| || |||||||| Sbjct 1 TCCATCTGGTCAGAAAAGACAA--TCTTTTGTGTCAAGCTTGGTGGCAAACGACCCGTAG 58 Query 6095 AAAGCGTTCGACAGCAGTTTTGCAATAGACCTCAAAGTTTGGtttttttCCTTGTCTGCC 6154 | ||||| ||||||| || || || || | || |||||| |||| | || || Sbjct 59 AGGGCGTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGG--TTTTGCGCGATCGGCG 116 Query 6155 TTTTCCTTGGCGGCTATGTTGAGCTGTACGTAATCCCTCGCCACGCATTTCCACTCCGGA 6214 |||||||| || ||||| ||||| ||||| || | ||| ||||| ||| | ||| Sbjct 117 CGCTCCTTGGCCGCGATGTT-AGCTGCACGTATTCGCGCGCAACGCACCGCCA-TTCGGG 174 Query 6215 AAAACGGTAGTGCGTTCGTCGGG 6237 ||| |||| ||||| ||| |||| Sbjct 175 AAAGCGGTGGTGCGCTCG-CGGG 196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104307210837962