Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq6776 136 4e-27 seq22 100 3e-16 seq146 93.3 4e-14 seq2782 87.8 2e-12 seq30454 82.4 7e-11 >seq6776 Length=2740 Score = 136 bits (150), Expect = 4e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 || ||||| || | ||| |||||| || |||||||| || | | || || | || Sbjct 1425 CAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCCTC 1366 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 ||||||||||| || || || |||| ||||||||||||| || | || ||||||||| Sbjct 1365 CTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTC 1306 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 | |||||| ||||| | | | | ||||||||||| |||||||||| || |||||| Sbjct 1305 CTGGATCTTGGCCTTCACATTCTCGATCGTGTCGCTCGGCTCCACCTCCAGCGCGATCGT 1246 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || |||| || ||||| || |||||||| Sbjct 1245 CTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 1213 >seq22 Length=338851 Score = 100 bits (110), Expect = 3e-16 Identities = 149/210 (71%), Gaps = 6/210 (3%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || || || ||||||||||| |||||||| |||| | ||| || |||| || Sbjct 330912 CACCAAGTGCAAGGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCCTC 330971 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || || || ||||| || || ||||| | || | | ||||||||| Sbjct 330972 GAGCTGCTTTCCGGCGAAGATCAAGCGTTGTTGGTCAGGGGGGATTCCTTCCTTGTCCTG 331031 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGT 35703 |||||| ||||| | | | | || || |||| || || || | ||||| || Sbjct 331032 GATCTTGGTCTTCACACTCTCGATGGTATCGGAGCTC---TCTACTTCGAGGGTGATGGT 331088 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTG 35733 || || ||||| || ||||| || ||||| Sbjct 331089 CTTGCCAGTCAAGGTCTTCACGAAGATCTG 331118 >seq146 Length=178297 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | | |||||| || | || |||||| ||||| ||||| ||| Sbjct 157680 TTCCACCACGAAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGAATATTGTAGTCGC 157739 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | ||| || |||| || || ||||| || || || || | ||||| ||||| | | Sbjct 157740 TGAGGGTGCGTCCGTCCTCGAGTTGCTTTCCAGCGAAGATGAGGCGCTGTTGGTCAGGGG 157799 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATT 35684 ||| | ||||||||| |||||| ||| | | | | ||||| |||| | Sbjct 157800 GAATTCCCTCCTTGTCTTGAATCTTTGTCTTGACGCTCTCGATGGTGTCAGAGCTC---T 157856 Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 | ||||||| |||||| || || || || | ||||||||||| ||||||| Sbjct 157857 CGACCTCCAACGTGATGGTCTTTCCAGTGAGTGTTTTCACAAAAATCTGCA 157907 >seq2782 Length=10868 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/233 (69%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||||| | | |||||| || | || |||||| || ||||||||||| | Sbjct 9764 CCACCACGTAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAG 9823 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || || ||||| || ||||| || | || || ||||| | ||| Sbjct 9824 AGGGTACGTCCATCCTCTAGTTGCTTGCCGGCAAAGATAAGACGTTGTTGGTCAGGGGGA 9883 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | | ||||||||| |||||| ||||| | | | ||||| |||| ||| Sbjct 9884 ATTCCTTCCTTGTCCTGGATCTTGGTCTTCACGGACTCGATGGTGTCTGAGCTC---TCC 9940 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCT 35739 ||||| | ||||| || || || || | || ||||| || |||||||| || Sbjct 9941 ACCTCGAGGGTGATGGTCTTGCCAGTGAGTGTCTTCACGAAGATCTGCATGCT 9993 >seq30454 Length=461 Score = 82.4 bits (90), Expect = 7e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | | |||||| || | || |||||||||||| ||||| |||| Sbjct 12 TTCCACCACGGAGGCGGAGCACCAAGTGAAGGGTGGACTCCTTTTGAATATTGTAGTCGG 71 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | ||| || | || || |||||||| || ||||| ||||| || || ||||| | | Sbjct 72 AGAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATCAAACGTTGTTGGTCAGGGG 131 Query 35628 GAACGCTCTCCTTGTCCATGATCTT 35652 ||| | ||||||||| ||||| Sbjct 132 GAATTCCTTCCTTGTCCTGAATCTT 156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450400919329960