Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_026594.1 Length=56537 Score E Sequences producing significant alignments: (Bits) Value seq6144 93.3 2e-14 >seq6144 Length=3234 Score = 93.3 bits (102), Expect = 2e-14 Identities = 284/427 (67%), Gaps = 19/427 (4%) Strand=Plus/Minus Query 36713 TCGGCCCTGCGGGCACCGGGAAGACCTTCCTGGCCATTCACCACGGACTGCGCCTGCTGG 36772 |||| || |||||||| || ||||||| || ||| | | || || | ||| | Sbjct 2082 TCGGGCCCGCGGGCACGGGCAAGACCTATCTCGCCGTGGCCTGCGCCGTGGACGCGCTCG 2023 Query 36773 AGGCCAAGGAAATCCAGCGACTCGTCATCACTCGCCCCGCCGTCGAGGCCGAGGAGAAGC 36832 || | | | || |||| |||| |||| || || ||||| || || | ||| | Sbjct 2022 AGCGCGACCAGGTCAAGCGCATCGTGCTCACGCGTCCGGCCGTGGAAGCGGGCGAGCGTC 1963 Query 36833 TCGGCTACCTGCCCGGCGGCATC-GAAG-AGAAGATGGCTCCGTACCTGATCCCGATGCT 36890 | |||| ||||||||||| ||| | | ||||| | | |||||| ||| |||| | Sbjct 1962 TGGGCTTCCTGCCCGGCG--ATCTGTCGCAGAAGGTCGATCCGTATCTGCGCCCGCTCTA 1905 Query 36891 GGACGCGGTGATCGACCTGGTTGGCC-CGAC--GATGGCCAAGCGCCTGCAGGAGACCCG 36947 || ||| | ||| ||| | ||| |||| || ||| ||| || ||| || Sbjct 1904 CGATGCGCTTTACGATCTGCTCGGCTTCGACAAGACGGCGAAGA---TGTTCGAG---CG 1851 Query 36948 CCAGCT---CGAGATCGCCCCGCTGGCCTACATGCGAGGCCGAACCTTCAACGACACGTT 37004 |||| | ||| ||||| ||||| ||||||||||| || || || |||| || |||| Sbjct 1850 CCAGATGATCGAAATCGCGCCGCTCGCCTACATGCGCGGGCGCACGCTCAATCACGCGTT 1791 Query 37005 CCTCATCGCCGACGAGATGCAGAACGCCAC-CCCGCGACAGGCCGCGCTGCTGGTGACCC 37063 | |||| ||||||| ||||||| |||| |||| | ||| | || | | || | Sbjct 1790 CATCATTCTCGACGAGGCGCAGAACACCACGCCCGAG-CAGATGAAGATGTTCCTCACGC 1732 Query 37064 GCCTGGGCTTCGGAACGCGGGCCGTCTTGAACGGTGACCCGGCCCAGTGCGACCTCCCG- 37122 | | |||||||| || ||| ||| ||| ||| ||| | ||||| |||| | ||| Sbjct 1731 GTATCGGCTTCGGCTCGAAGGCGGTCGTGACCGGCGACACCACCCAGATCGACTTGCCGC 1672 Query 37123 GCGGGCA 37129 |||| || Sbjct 1671 GCGGCCA 1665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180647184659106