Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq146 114 1e-20 seq59190 113 5e-20 seq30454 109 6e-19 seq2782 109 6e-19 seq22 109 6e-19 seq6776 96.9 3e-15 seq66879 91.5 1e-13 seq62579 84.2 2e-11 seq612 82.4 8e-11 >seq146 Length=178297 Score = 114 bits (126), Expect = 1e-20 Identities = 159/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | || || | ||| | ||| || ||||| |||||||| |||||||||||| Sbjct 157037 TTCCACCACGAAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGG 157096 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | |||| | || ||||| || ||||| |||||||||||||| || || ||||| | Sbjct 157097 AGAGGGTGCGTCCATCCTCGAGTTGCTTGCCAGCAAAAATCAAACGTTGTTGGTCGGGGG 157156 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || ||||| || || || || || ||||| | || | |||||||| || | Sbjct 157157 GGATTCCTTCCTTGTCCTGGATCTTGGTCTTGACGGACTCGATGGTGTCGGAGCTCTCGA 157216 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAAT 134707 | || ||||| ||||| || || || | || || ||||| || Sbjct 157217 CCTCAAGAGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGAT 157259 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 || || || | ||| || | ||| | ||| || ||||| ||||| || |||||||||||| Sbjct 156622 TTGCCACCACGGAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 156681 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | |||| | || || || || ||||| || || |||||||| || || || || Sbjct 156682 GAGAGGGTGCGTCCATCCTCTAGTTGCTTGCCAGCGAAGATCAAACGTTGTTGGTCAGGG 156741 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || ||||| || || || || || ||||| | || | || ||||| || Sbjct 156742 GGGATTCCTTCCTTGTCCTGGATCTTGGTCTTGACAGACTCGATGGTATCGGAGCTCTCT 156801 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTG 134710 || || ||||| ||||| || || || | || || ||||| || || Sbjct 156802 ACCTCAAGAGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGATCTG 156848 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| || ||||| ||||||||||||||||||||| | |||| | Sbjct 157371 AGGCGGAGCACCAAGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGT 157430 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || ||||| || || || || || || | || || || || || || || || || Sbjct 157431 CCATCCTCGAGTTGCTTTCCGGCGAAGATGAGGCGTTGTTGGTCAGGGGGAATTCCCTCC 157490 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATTCCACGTCGAGAGT 134674 || ||||||| | || || | ||| |||| ||||| || || || |||||||| Sbjct 157491 TTGTCTTGAA-TCTTAGTCTTTACGCTCTCAATGGTGTCAGAGCTCTCGACTTCGAGAGT 157549 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTG 134710 ||| || || || || | || |||||||| || || Sbjct 157550 AATAGTCTTGCCAGTGAGGGTCTTAACGAAGATCTG 157585 >seq59190 Length=243 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563 ||||||||| || ||||| |||||||| ||||||||||| || || | || || Sbjct 241 CACGAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAAAGAGTACGTCCATCCTC 182 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 |||||| || || || || || | |||||| || ||||| || || || ||||| ||||| Sbjct 181 GAGCTGCTTTCCAGCGAAGATGAGACGCTGTTGGTCGGGAGGGATTCCCTCTTTGTCTTG 122 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 || || ||||| || | ||||| || || || || || || ||||| || || Sbjct 121 GATCTTGGTCTTGACACTCTCGATAGTGTCAGAGGACTCGACCTCAAGGGTAATTGTCTT 62 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||| || | || || |||||||| ||||| Sbjct 61 ACCCGTGAGGGTCTTGACGAAAATCTGCAT 32 >seq30454 Length=461 Score = 109 bits (120), Expect = 6e-19 Identities = 158/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | ||| || | ||| | ||| || ||||| ||||||||||| ||||||||| Sbjct 12 TTCCACCACGGAGGCGGAGCACCAAGTGAAGGGTGGACTCCTTTTGAATATTGTAGTCGG 71 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | |||| | || |||||||| ||||| ||||| |||||||| || || || || | Sbjct 72 AGAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATCAAACGTTGTTGGTCAGGGG 131 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || ||||| || || ||||| || || || | || | ||||| || || | Sbjct 132 GAATTCCTTCCTTGTCCTGAATCTTGGTCTTTACTGACTCGATAGTGTCAGAGCTCTCAA 191 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAAT 134707 | || || ||||| || ||||| || | || || ||||| || Sbjct 192 CCTCAAGGGTAATAGTCTTACCAGTGAGGGTCTTGACGAAGAT 234 >seq2782 Length=10868 Score = 109 bits (120), Expect = 6e-19 Identities = 164/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 || || || | ||| || | ||| | ||| || ||||| ||||| || |||||||||||| Sbjct 8820 TTGCCACCACGGAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 8879 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | |||| | || |||||||| ||||| ||||| |||||||| || || || || Sbjct 8880 GAGAGGGTGCGTCCATCCTCGAGCTGCTTGCCGGCAAAGATCAAACGTTGTTGGTCAGGG 8939 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || ||||| || || || || || || || | || | ||||| || || Sbjct 8940 GGGATTCCTTCCTTGTCCTGGATCTTCGTCTTCACGGACTCAATGGTGTCAGAGCTCTCG 8999 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || | |||||||||||||| || | || || |||||||| | || ||| Sbjct 9000 ACCTCCAAGGTAATGGTTTTACCAGTGAGGGTCTTGACGAAAATCTACAATTT 9052 >seq22 Length=338851 Score = 109 bits (120), Expect = 6e-19 Identities = 158/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | ||| || | ||| | ||| || ||||| ||||| || ||||||||||||| Sbjct 331529 TTCCACCACGGAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGC 331588 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | |||| | || || ||||| || || ||||| ||||||||||| || ||||| | Sbjct 331589 TCAAGGTGCGTCCATCCTCAAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGGTCGGGGG 331648 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||| || || ||||| || || || || || | || || || || | Sbjct 331649 GGATGCCCTCCTTGTCTTGGATCTTGGTCTTCACGCTCTCGATGGTATCAGAGCTCTCGA 331708 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAAT 134707 | || | ||| ||||| || ||||| || || || |||||||| Sbjct 331709 CCTCTAAAGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAAAT 331751 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | || || | ||| ||||| || ||||| ||||| |||||||||||||| Sbjct 332200 TTCCTCCACGAAGGCGGAGCACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAG 332259 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 || ||| || ||||| || ||||| || ||||| | ||| || || || || | Sbjct 332260 AAAGGGTCCTTCCATCCTCGAGTTGCTTGCCAGCGAAAATGAGACGTTGTTGGTCAGGGG 332319 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || || || || || || || || ||||| || | ||||| || || | Sbjct 332320 GGATTCCCTCCTTGTCCTGGATCTTAGTCTTGACACTCTCGATAGTGTCAGAGCTCTCGA 332379 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAAT 134707 | || | ||||||||| || || || | ||| || |||||||| Sbjct 332380 CCTCCAAAGTAATGGTCTTTCCTGTGAGAGTCTTCACGAAAAT 332422 Score = 82.4 bits (90), Expect = 8e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | || || | ||| | ||| | ||||| ||||||||||| ||||||||| Sbjct 331301 TTCCTCCGCGAAGGCGAAGCACCAAGTGCAAGGTGGACTCCTTTTGAATATTGTAGTCGG 331360 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | |||| | || ||||| || || || || || || | || || || || || | Sbjct 331361 AGAGGGTGCGTCCATCCTCGAGTTGCTTTCCGGCGAAGATAAGGCGTTGTTGGTCAGGGG 331420 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || ||||| || ||||| || ||| || || || | || || || || | Sbjct 331421 GGATTCCTTCCTTGTCTTGGATCTTTGTCTTCACGCTCTCGATGGTATCAGAGCTCTCGA 331480 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || | || ||||| || ||||| | || || ||||| ||||||||| Sbjct 331481 CCTCCAAGGTGATGGTCTTTCCGGTGAGGGTCTTGACGAAGATTTGCATT 331530 >seq6776 Length=2740 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| ||||| |||||||| ||||| || ||||||||||| | ||| | Sbjct 1430 AGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGG 1371 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || || |||| |||||||| || ||||| ||||| || Sbjct 1370 CCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCC 1311 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | |||||| || ||||| || || | Sbjct 1310 TTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGCTCGGCTCCACCTCCAGCGCG 1251 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || ||||| || ||||| Sbjct 1250 ATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 1213 >seq66879 Length=210 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 |||||||| | || | || ||||| || ||| |||||||| ||||||||||||| Sbjct 67 CCTCCTCTCAAGCGGAGGACAAGGTGCAGTGTGCTCTCCTTTTGGATGTTGTAGTCGCTC 126 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || || | ||| || || || || ||||||||||| || || || || Sbjct 127 AAAGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCAGGGGGG 186 Query 134607 ATGCCTTCTTTTTCTTGAATTTT 134629 || |||||||| || |||||||| Sbjct 187 ATTCCTTCTTTGTCCTGAATTTT 209 >seq62579 Length=228 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| ||||| |||||||| ||||| || ||||||||||| | ||| | Sbjct 86 AGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGG 145 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || || |||| |||||||| || ||||| ||||| || Sbjct 146 CCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCC 205 Query 134616 TTTTCTTGAATTTT 134629 || || || || || Sbjct 206 TTGTCCTGGATCTT 219 >seq612 Length=73199 Score = 82.4 bits (90), Expect = 8e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 8233 GCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGC 8292 ||||| |||| ||||| || ||||||| ||||||||||||||||| ||| | | Sbjct 23880 GCCATCCTCGAGGCTCAAATAGAGACCGGTAATCCGTACATGCTGTACAAGGACTCGGCC 23821 Query 8293 AACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAA 8352 ||| || ||||| ||| | || ||||| | ||| ||||| || ||| | || Sbjct 23820 AACAGGAAGTCGAATCAGCAAAACCTTGGGACCATCTCTTGTAGCAACCTCTGCACAGAG 23761 Query 8353 ATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTC 8402 || | | |||| |||||| ||||| || || || ||||| || ||||| Sbjct 23760 ATAATCGAATACACCGCGCCAGACGAGGTTGCTGTGTGCAACCTTGCGTC 23711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504958153771240