Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_027334.1 Length=47800 Score E Sequences producing significant alignments: (Bits) Value seq7990 84.2 7e-12 >seq7990 Length=2043 Score = 84.2 bits (92), Expect = 7e-12 Identities = 123/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 29895 GGTCTATGTCGACGACATGCGGGCGCAATTCGGGCGCATGAAAATGTGCCATATGTTCGC 29954 |||||| |||||||||||||| || | ||||| |||||| ||||| || ||| |||| Sbjct 2043 GGTCTACGTCGACGACATGCGCGCCAACTTCGGCCGCATGGTGATGTGTCACATGGTCGC 1984 Query 29955 GGACAGCACGGCTGAGTTGGTGGCCATGGCGGACCGGATCGGCGTCGCACGCAAGTGGAT 30014 ||||| | || ||| || ||||| | || ||||||||||| ||||| ||| Sbjct 1983 GGACACTGACGAGGAATTGCACGCGATGGCCGCTCGCATCGGCGTCGCCCGCAAATGGCA 1924 Query 30015 CCAGCATGCCGGGACGCCGCGGGAGCATTTCGACGTTGCGATGTCCAAGCGGGC 30068 ||| | | |||||| ||| || | |||| || |||||||||| || Sbjct 1923 TCAGAAGCCGGGGACGTCGCACAGCCACTACGACATTTGCCTGTCCAAGCGCGC 1870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152711921161228