Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq146 91.5 1e-13 seq22 86.0 5e-12 >seq146 Length=178297 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || ||||||||||||||||| | | |||| |||| ||| Sbjct 157700 ACCAAGTGGAGGGTGGACTCCTTCTGAATATTGTAGTCGCTGAGGGTGCGTCCGTCCTCG 157759 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || || || || ||| | ||||| |||||||| || || || | ||||| || || Sbjct 157760 AGTTGCTTTCCAGCGAAGATGAGGCGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCTTGA 157819 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| | || | | | || | ||||| | | || || || | || || | || Sbjct 157820 ATCTTTGTCTTGACGCTCTCGATGGTGTCAGAGCTCTCGACCTCCAACGTGATGGTCTTT 157879 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCA 27246 || || || ||||||||||| || |||| Sbjct 157880 CCAGTGAGTGTTTTCACAAAAATCTGCA 157907 >seq22 Length=338851 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 |||||||| | || | ||||| || || || || || |||||||||||||||||| Sbjct 331303 CCTCCGCGAAGGCGAAGCACCAAGTGCAAGGTGGACTCCTTTTGAATATTGTAGTCGGAG 331362 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | || ||||| || || |||||| | || || || ||||| || || || Sbjct 331363 AGGGTGCGTCCATCCTCGAGTTGCTTTCCGGCGAAGATAAGGCGTTGTTGGTCAGGGGGG 331422 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || |||||| | |||| | | || | || || | | || || Sbjct 331423 ATTCCTTCCTTGTCTTGGATCTTTGTCTTCACGCTCTCGATGGTATCAGAGCTCTCGACC 331482 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | || || | || || || || || || || ||||||||||| Sbjct 331483 TCCAAGGTGATGGTCTTTCCGGTGAGGGTCTTGACGAAGATTTGCAT 331529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424573498831944