Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_027991.1 Length=147303 Score E Sequences producing significant alignments: (Bits) Value seq2348 165 8e-36 >seq2348 Length=11484 Score = 165 bits (182), Expect = 8e-36 Identities = 204/278 (73%), Gaps = 12/278 (4%) Strand=Plus/Minus Query 58077 GCACGCTACAGCTGATTAAAGAACACGGCTGTAAAGCGGGGCTGGTATTCAACCCGGCAA 58136 ||||||| |||||| || |||||||| || ||||| || || ||||||||||| | Sbjct 2263 GCACGCTCTCGCTGATCCGTGACCACGGCTGCAAGGCGGGCCTCGTGTTCAACCCGGCTA 2204 Query 58137 CGCCGCTCAGTTATCTCGATTACGTCATGGACAAACTGGATGTGATCCTGCTGATGTCCG 58196 ||||||| | ||| ||||| |||| |||||||| || ||| | | || | ||||| | Sbjct 2203 CGCCGCTGAATTACCTCGACCACGTGATGGACAAGCTCGATCTCGTGCTCATCATGTCGG 2144 Query 58197 TGAACCCAGGCTTCGGCGGCCAGTCTTTTATTCCGCAGACGCTGGATAAACTGCGCGAAG 58256 |||| || || |||||||||||||| || ||||| || |||| | || |||||||| | Sbjct 2143 TGAATCCGGGATTCGGCGGCCAGTCGTTCATTCCCGAGGCGCTCAACAAGCTGCGCGAGG 2084 Query 58257 TGCG--------TCGCCGCATTGATG---CG-TCCGGTTACGACATTCGCCTGGAAGTGG 58304 ||| ||| ||| | | | || | || ||| || | ||| ||||||| Sbjct 2083 CGCGCGCAAAGATCGACGCCTACACGGCCCGCACGGGCCGCGAAATCCACCTCGAAGTGG 2024 Query 58305 ACGGCGGCGTGAAGGTGAACAATATCGGCGAGATCGCG 58342 |||||||||||||||| ||||||||| ||| |||||| Sbjct 2023 ACGGCGGCGTGAAGGTCGACAATATCGCCGAAATCGCG 1986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470831107332760