Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq4462 109 1e-19 >seq4462 Length=5303 Score = 109 bits (120), Expect = 1e-19 Identities = 221/321 (69%), Gaps = 8/321 (2%) Strand=Plus/Minus Query 41142 CAAATAGGGGCAATT-ATGGCCGGTTCACTGAACAAAGTAGAAATCATTGGCAACTTAGG 41200 |||| ||| | |||| ||||| || ||||||| || || | |||||| | || Sbjct 5113 CAAACAGGAGAAATTCATGGCA---TCCGTGAACAAGGTGATCCTCGTCGGCAACCTCGG 5057 Query 41201 CAACGATCCAGAAATCCGTTACATGCCAAGCGGCGGCGCGGTTGCTAATCTAAGCATCGC 41260 | |||||| ||| | || || |||| ||||||| ||| || || || | || |||| Sbjct 5056 CGCCGATCCGGAAGTGCGCTATCTGCCGAGCGGCGACGCCGTGGCGAACATTCGCCTCGC 4997 Query 41261 CACAACTGAAAGCTGGAAGGATAAAACCACCGGCGAGAAGAAAGAACAAACGGAATGGCA 41320 ||| || || ||| ||||| || | |||||||| || ||| || |||||||| Sbjct 4996 CACGACCGACCGCTACAAGGACAAGGCGTCCGGCGAGTTCAAGGAAATGACCGAATGGCA 4937 Query 41321 CCGCGTTGTC-ATCTTCGGTAAGCTGGCAGAAATTG-CTAGCGAATACCTGCGCAAAGGT 41378 ||||| |||| ||||||| ||||| || || | || | || |||||| || ||| Sbjct 4936 CCGCG-TGTCGTTCTTCGGGCGCCTGGCCGAGATCGTCTCG-GAGTACCTGAAGAAGGGT 4879 Query 41379 AGCAAGGTGTTCATTGAAGGCAGCCTGCGAACGCGTAAATGGCAGGACCAGGCTGGCGTT 41438 ||||| || |||||| || | || ||||| |||||||| | |||| ||| Sbjct 4878 TCGTCGGTGTATATCGAAGGCCGCATCCGCACGCGCAAATGGCAAGCGCAGGACGGCACC 4819 Query 41439 GATCGCTACACCACTGAAATC 41459 || |||||| | || |||||| Sbjct 4818 GACCGCTACTCGACGGAAATC 4798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133099364643432