Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_028113.1 Length=35685 Score E Sequences producing significant alignments: (Bits) Value seq61051 232 2e-56 >seq61051 Length=235 Score = 232 bits (256), Expect = 2e-56 Identities = 198/237 (84%), Gaps = 8/237 (3%) Strand=Plus/Plus Query 6033 CTGGTCGGCAAAAACAAtttttttATTGTCCAGCTTAGTGGCAAAGGACCCGTAGAGGGC 6092 |||||| | ||| ||||| |||| |||| ||||| |||||||| |||||||||||||| Sbjct 6 CTGGTCAGAAAAGACAATCTTTTG--TGTCAAGCTTGGTGGCAAACGACCCGTAGAGGGC 63 Query 6093 GTTGGAGAGCAGCTTGGCGATGGAACGCAGGGTCTGGTTTTTGTCGCGGTCGGCGCGCTC 6152 |||||| |||| |||||||||||| |||||||| ||||||| |||| ||||||||||| Sbjct 64 GTTGGACAGCAACTTGGCGATGGAGCGCAGGGTTTGGTTTT--GCGCGATCGGCGCGCTC 121 Query 6153 CTTGGCGGCAATGTTGAGCTGCACGTACTCGCGCGCCAGGCAGCGCCACTGCGGAAAGAC 6212 |||||| || ||||| ||||||||||| |||||||| | ||| ||||| | |||||| | Sbjct 122 CTTGGCCGCGATGTT-AGCTGCACGTATTCGCGCGCAACGCACCGCCATTCGGGAAAG-C 179 Query 6213 GGTGGTGCGCTCGTCGGGGAGCAGACGCACGCGCCAGCCGCGGTTGTGCAGCGTCAC 6269 ||||||||||||| |||| | ||| |||||||||| ||| || ||||||| || || Sbjct 180 GGTGGTGCGCTCG-CGGGCACCAGGTGCACGCGCCAACCGAGG-TGTGCAGGGTGAC 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113976002965418