Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq4906 100 4e-16 >seq4906 Length=4638 Score = 100 bits (110), Expect = 4e-16 Identities = 247/361 (68%), Gaps = 34/361 (9%) Strand=Plus/Minus Query 184467 GCGTGGTTGCCCCAGAGCAGGAAGACCAGGCCCTCGGTCTTCTTGGAGAGTTGCGTGATG 184526 ||||| |||||| |||| ||| || ||| |||| | || ||||||| ||| Sbjct 3939 GCGTGCGCGCCCCACAGCATGAACACGAGGTGCTCGTGGCGCGCGGCGAGTTGCTGGATC 3880 Query 184527 ACCCTGTCGCTG-AGCACCCTCCAGCCCAGGTTGGAGTGCGACCCGG-GCACGCCTCTGA 184584 | | ||||| || ||| | | |||||| | || | ||| | ||| || ||| | Sbjct 3879 AGCGTGTCGGTGCAGCGCTC-CCAGCCGCGCTTCGCGTGGCTCGCGGCGCTCGCGC--GC 3823 Query 184585 TC-ACGGTGAAGGCCGTGTTCAGCAGGAGCACCCCCTGGCGCGCCCAGCTGTCGAGGTGG 184643 || ||||| | ||||||||||||| ||||| ||||||||||||||| |||||| | Sbjct 3822 TCGACGGTCAGCACCGTGTTCAGCAGCAGCACGCCCTGGCGCGCCCAGGCGTCGAGACAG 3763 Query 184644 CCGTGGTTGGGCGTCCGGAACCCCTCGATGGAGCGTTGC-AGCTCCCTGTAGATGTTGCG 184702 ||||| | |||| || ||| || || || || || | |||| || |||||||||| Sbjct 3762 CCGTGCGTCGGCG-CCTGAATGCC--GA-GGCTCGCCGCGATCTCCTTGAAGATGTTGCG 3707 Query 184703 CAGCGACGGCGCCACG-GCCCCGT------CACCCGTGGAGAAGGCCAGGCCGT------ 184749 |||||| |||| | | || ||| |||| ||||| |||||||||| Sbjct 3706 CAGCGAAGGCGGCGGGCGCACCGAGGGCGGCACC----GAGAACGCCAGGCCGTGCGCCT 3651 Query 184750 -CGGCGCGACGGGGT-TGCG----GGTACGGGTCCTGACCCACGATGACGACCTTGACGT 184803 ||||| | | | | | || ||||||||||||| || | ||| |||||||| |||| Sbjct 3650 GCGGCGTGCCTCGATCTTCGCCGTGGTACGGGTCCTGGCCGAGGATCACGACCTTCACGT 3591 Query 184804 C 184804 | Sbjct 3590 C 3590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658165380517120