Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq4462 172 2e-38 >seq4462 Length=5303 Score = 172 bits (190), Expect = 2e-38 Identities = 235/326 (72%), Gaps = 9/326 (3%) Strand=Plus/Minus Query 7282 GTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACATGCCC 7341 || ||||| || || || || || ||| |||| | || |||||| ||||| |||| Sbjct 5088 GTGAACAAGGTGATCCTCGTCGGCAACCTCGGCGCCGATCCGGAAGTGCGCTATCTGCCG 5029 Query 7342 AACGGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAAGCAG 7401 | |||| | || ||| | ||||| ||||||||| | ||| ||| ||||||||| | Sbjct 5028 AGCGGCGACGCCGTGGCGAACATTCGCCTCGCCACGACCGACCGCTACAAGGACAAGGCG 4969 Query 7402 ACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCGCCTGGCG 7461 ||||| || ||||| |||| | ||||||||| ||||||||| |||||||| Sbjct 4968 TCCGGCGAGTTCAAGGAAATGACCGAATGGCACCGCGTGTCGTTCTTCGGGCGCCTGGCC 4909 Query 7462 GAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAGCCTGCGC 7521 ||||||| | ||||||||| |||||||| ||| || |||||||| || | ||| Sbjct 4908 GAGATCGTCTCGGAGTACCTGAAGAAGGGTTCGTCGGTGTATATCGAAGGCCGCATCCGC 4849 Query 7522 ACCCGCAAGTGGCAGGCTCAGGACGGCCAGGACCGATACACCACCGAGGTAATCGTCGAC 7581 || ||||| ||||| || ||||||||| ||||| ||| | || || |||||||| | Sbjct 4848 ACGCGCAAATGGCAAGCGCAGGACGGCACCGACCGCTACTCGACGGA---AATCGTCGCC 4792 Query 7582 ATGCACGGACAGATGCAGATGCTTGG 7607 || |||||||||||||| || Sbjct 4791 G---AC---CAGATGCAGATGCTGGG 4772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194657980658614