Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_028770.1 Length=59878 Score E Sequences producing significant alignments: (Bits) Value seq6144 123 1e-23 >seq6144 Length=3234 Score = 123 bits (136), Expect = 1e-23 Identities = 296/441 (67%), Gaps = 14/441 (3%) Strand=Plus/Minus Query 5822 ACGACCTGACCGTCTCCACCGGCCCAGCAGGGACGGGGAAGACCTTCCTGGCCATCCACC 5881 ||||| |||| || || ||| || || || ||||| ||||||| || ||| | | Sbjct 2100 ACGACGTGACGTTCGGCATCGGGCCCGCGGGCACGGGCAAGACCTATCTCGCCGTGGCCT 2041 Query 5882 ACGGCCTGCGCCTGCTGGAGGCCGGGGAGATCCAGCGCCTCGTCATCACCCGGCCCGCCG 5941 || | || | ||| ||| || || || ||||| |||| |||| || || |||| Sbjct 2040 GCGCCGTGGACGCGCTCGAGCGCGACCAGGTCAAGCGCATCGTGCTCACGCGTCCGGCCG 1981 Query 5942 TTGAGGCAGATGAGAAGCTCGGCTTCCTGCCCGGCACTGTGGACGAGAAGATGGCACCCT 6001 | || || | ||| || ||||||||||||||| | || ||||| | | || | Sbjct 1980 TGGAAGCGGGCGAGCGTCTGGGCTTCCTGCCCGGCGATCTGTCGCAGAAGGTCGATCCGT 1921 Query 6002 ACCTCACCCCGATGCTGGACGCGGTGATCGACCTGGTCGGC-CCGAC--GATGACGAAGC 6058 | || |||| | || ||| | ||| ||| ||||| |||| || | ||||| Sbjct 1920 ATCTGCGCCCGCTCTACGATGCGCTTTACGATCTGCTCGGCTTCGACAAGACGGCGAAG- 1862 Query 6059 GCCTCCTCGAGTCGCGCCAGCTG---GAGGTCGCCCCGCTGGCCTACATGCGAGGCCGGA 6115 | |||| ||||||| || || |||| ||||| ||||||||||| || || | Sbjct 1861 --ATGTTCGA---GCGCCAGATGATCGAAATCGCGCCGCTCGCCTACATGCGCGGGCGCA 1807 Query 6116 CGTTCAACGACACGTACATCGTCGCTGACGAGATGCAGAACGCCAC-CCCGCGCCAGACC 6174 || |||| || ||| |||| | |||||| ||||||| |||| |||| | |||| Sbjct 1806 CGCTCAATCACGCGTTCATCATTCTCGACGAGGCGCAGAACACCACGCCCGAG-CAGATG 1748 Query 6175 GCGCTGCTGGTGACCCGCCTGGGCTTCGGGACGAAGGCCGTCCTGAACGGTGACCCGGCC 6234 | || | | || || | |||||||| ||||||| ||| ||| ||| ||| | || Sbjct 1747 AAGATGTTCCTCACGCGTATCGGCTTCGGCTCGAAGGCGGTCGTGACCGGCGACACCACC 1688 Query 6235 CAGTGCGACCTGCCGCCCGGC 6255 ||| |||| |||||| |||| Sbjct 1687 CAGATCGACTTGCCGCGCGGC 1667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 191329537336960