Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_028809.1 Length=58637 Score E Sequences producing significant alignments: (Bits) Value seq4028 120 1e-22 >seq4028 Length=6092 Score = 120 bits (132), Expect = 1e-22 Identities = 113/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 4903 CGAGCTGTGGGACGCGGTCATGCGCTCCACCTGGGACTGGGCCGAGCCGGGCGTCCTGTT 4962 || ||||||||| ||| ||||||| || |||| ||| ||||||||||||||| |||| Sbjct 3157 CGCGCTGTGGGATGCGATCATGCGTTCGACCTACGACGTGGCCGAGCCGGGCGTGGTGTT 3098 Query 4963 CATCGACCGCATCAACGAGATGAACAACCTCCACTACTGCGAGACCATCGCGGCGACCAA 5022 |||| ||||| |||||| |||||||| | | ||| ||||| |||||||| Sbjct 3097 CATCTCGCGCATGAACGAGGACAACAACCTGCGCGCGCTCGAATCCATCCGCGCGACCAA 3038 Query 5023 CCCGTGCGGCGAGCAGCCGCTGCC 5046 |||||||||||||||||| ||||| Sbjct 3037 CCCGTGCGGCGAGCAGCCTCTGCC 3014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187361623636506