Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30] 69,687 sequences; 205,175,886 total letters Query= NC_028876.1 Length=109800 Score E Sequences producing significant alignments: (Bits) Value seq5875 107 1e-18 >seq5875 Length=3462 Score = 107 bits (118), Expect = 1e-18 Identities = 126/166 (76%), Gaps = 7/166 (4%) Strand=Plus/Minus Query 96689 TTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATA 96748 ||||| ||||| |||| || ||||| ||||| ||||| ||||| || | || || || Sbjct 242 TTGATGAGGCCGGTGATGACGTCCACCGAGGGTCGCTGGGTCGCGAGAATCAGGTGGATG 183 Query 96749 CCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTTGTAG 96808 ||||| |||||||| ||||| |||| || | || | |||| |||| |||| Sbjct 182 CCGGCGGCGCGCGCTTTCTGTGCGAGACGCGCGATCAATTCTTCGA--TCTT-CTTGC-- 128 Query 96809 CCGCC--CATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGAT 96852 ||||| |||||||||||| ||||||||||||| ||| |||||||| Sbjct 127 CCGCCACCATCATGAGGTCGGCGAGTTCGTCGATCACGACCACGAT 82 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 350936892322527