Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Physarum_20polycephalum_20[genbank_20GCA_5F000413255.3_202014-06-30]
69,687 sequences; 205,175,886 total letters
Query= NC_028896.1
Length=32675
Score E
Sequences producing significant alignments: (Bits) Value
seq2320 172 1e-38
>seq2320
Length=11620
Score = 172 bits (190), Expect = 1e-38
Identities = 819/1286 (64%), Gaps = 69/1286 (5%)
Strand=Plus/Minus
Query 19805 TTCGAATATCAGTTGCACTGGTATCGCGCCGGGCTTGAGCACCGCATCCGCGATATCCTG 19864
||||| ||||| | ||||||||| |||| | ||| ||| ||| | || ||
Sbjct 9615 TTCGACTATCAAAAGGTCTGGTATCGGCAAGGGCATCAGC---GCACGCGCAACATTCTC 9559
Query 19865 AAATCCCGCCAGATTGGCGCGACGTTTTATTTTTCCCGCGAGGCGCTGCTGCGCGCCCTG 19924
|| || || ||||| |||||||||| ||||| | || ||||| ||| ||| |
Sbjct 9558 AAGTCGCGGCAGATCGGCGCGACGTGGTATTTCGCACGAGAGGCACTGGACGACGCGATC 9499
Query 19925 AAAACCGGTCATAACCAGATTTTTCTGTCGGCCAGTAAAACGCAGGCGTATGTGTTC-CG 19983
| ||||| | | |||||||||||||||||||| || | || ||| | || ||| ||
Sbjct 9498 ACGACCGGCCGCGATCAGATTTTTCTGTCGGCCAGCAAGGCACACGCGCACGTTTTCACG 9439
Query 19984 CGAATACATCATCGCC--TTTGCCCGGCTGGTTGACGTTGAC---CTGACCGGTGACCCG 20038
| | ||||| | ||| ||||| || || | || || | || || || ||||||
Sbjct 9438 C-AGTACAT--TTGCCAGTTTGCGCGCGAGGCCGCCGATGTCGAGCTAACAGGCGACCCG 9382
Query 20039 ATTGTCCTGGGCAATAACGGCGCAAAACTGATTTTTCTCGGCACCAACTCCAACACCGCA 20098
|| || || ||| | |||| | | ||||| ||||| ||| | |||||||
Sbjct 9381 ATCATCTTGCCGAATGA-GGCG--ACGTTACGCTTTCTAGGCACGAACGCGCGCACCGCA 9325
Query 20099 CAGAGCCATAACGGCGACCTGTACGTCGACGAGATTTTCTGGA-TCCCGAATTTTCAGGT 20157
|||||| || ||||| | | || ||||||| || |||| | || |||| | |
Sbjct 9324 CAGAGCTATCACGGCAATTTCTATTTCGACGAATACTTTTGGACTGGCGGATTT-CGCGA 9266
Query 20158 ACTGCGTAAGGTGGCATCAGGTATGGCCTCACAGAGTCACCTGC-GCTCGACCTATTTCT 20216
||| |||||| || || || ||||| || | | || | ||||||||||
Sbjct 9265 GCTGAATAAGGTCGCGTCGGGCATGGCGATGCACAAAAAAATGGAGAAAAACCTATTTCT 9206
Query 20217 CCACCCCGTCCACGCTGGCGCACGACGCCTACCCGTTCTGGTCGGGTGAACTGTTCAACC 20276
|||| ||||| | | | || | |||||| | |||||| || || | |||||||
Sbjct 9205 CCACGCCGTCGAGCATTGGACATGCCGCCTATACCTTCTGGAGTGGCGAGCACTTCAACC 9146
Query 20277 GGGGACGCGCCAGCGCCGCCGAACGCGTGGAAATCGACGTCAGTCATAACGCCCTTGCCG 20336
| || ||||| | | || | | || | | ||||| | | || || || ||||
Sbjct 9145 GAGGCCGCGCAAAGGTCGATCATC---TGCATCTGGACGTAACGCGCAAGGCGCTCGCCG 9089
Query 20337 GAGGTCTTCTCTGTGCGGACGGCCAGTGGCGGCAGATTGTCACCATTGAGGACGCCCTGA 20396
| || | |||||| | ||| | || ||||| ||||| || ||| | ||||| ||| |
Sbjct 9088 GCGGCCGTCTCTGCGAGGATAGGCAATGGCGCCAGATCGTGACCGTCGAGGATGCCGTCG 9029
Query 20397 AAGGCGGCTGCACGCTGTTCGACATTGAGCAGCTCAAACGTGAAAACAGCGCCGACGATT 20456
||||| ||| |||||||| || | |||| | |||| ||||||| | || |
Sbjct 9028 CCGGCGGGTGCGACCTGTTCGATATCGGCGAGCTACGTCTTGAATACAGCGCGCAGGAAT 8969
Query 20457 TTAAAAACCTGTTCATGTGTGAATTTGTTGACGACAAGGCGTCGGTGTTCCCGTTCGAGG 20516
|| ||||| ||||| | ||| | ||||| | |||||| | |||||| ||| ||
Sbjct 8968 ACGCCAATCTGTTGATGTGCCAGTTTATCGACGATACAGCGTCGATTTTCCCGCTCGCGG 8909
Query 20517 AGCTGCAACGTTGCATGGTCGACACGCTGGAAGAATGGGAAGACTATGCGCCGTTTGCCG 20576
| | || |||||||||||||| |||||
Sbjct 8908 ATTTACAGCGTTGCATGGTCGA--------------------------------TTGCCC 8881
Query 20577 CAAATCCGTTCGGCTCCCGCCCGGTATGGATTGGTTACGACCCGTCAC-ACCGTGGCGAC 20635
| || ||||||| |||||| | ||| | || || ||||| | | | || || |||
Sbjct 8880 C--GCCCTTTCGGCTATCGCCCGCTGTGGGTCGGCTATGACCCAGCGCTATCG-GGTGAC 8824
Query 20636 AGCGCCGGAT---GCGTGGTACTGGCACCGCCGGTGGTGGCCGGTGGCAAATTCAGAATA 20692
||||| | |||| | | |||||||||| |||| | || ||||| || | |
Sbjct 8823 TCGGCCGGCTTGAGCGTCG---TCGCACCGCCGGCGGTGCCTGGGGGCAAGTTTCGCGTG 8767
Query 20693 CTTGAGCGTCACCAGTGGAAAGGCATGGACTTTGCCACCCAGGCGGAATCCATCCGCAAA 20752
|| | ||| ||| |||||||| || | | ||||| || | || |||
Sbjct 8766 CTGCACAAGTGCCAATGGCGCGGCATGGATTTCGAGGCACAGGCCGAGGCGATACGCGCG 8707
Query 20753 CTCACCGAAAAATATAACGTTGAATACATCGGGATTGATGCCACCGGCCTCGGTGTCGGC 20812
|||| | |||| ||||| | || || | ||| ||| | || ||| |||| |||
Sbjct 8706 ATCACGCAGCAATACAACGTCGCCTATATGGCGATCGATACGACAGGCATCGGCCAGGGC 8647
Query 20813 GTGTTCCAGCTCGTGCGCTCGTTCTATCCCGCCGCGCGCGATATCCGCTACACGCCGGAA 20872
|| | |||||||| | ||||||||| |||| || || ||| |||| |||
Sbjct 8646 GTCTATCAGCTCGTCAGGCAGTTCTATCCGAACGCGGTCGCGCTCAACTATTCGCCAGAA 8587
Query 20873 ATGAA-AACCGCAATGGTGCTC-AAGGCAAAAGAC-GTTATCCGCCGTGGCTGTCTGGAA 20929
| || |||| |||||||| ||||| | | || ||| | ||| | || |||
Sbjct 8586 GTTAAGGGCCGC-CTGGTGCTCAAAGGC--TTGTCGGTGATCGGTAAGGGCCGGCTCGAA 8530
Query 20930 TATGACGTCAGCGCCACCGACATCACCAGCTCGTTTATGGCTATCCGCAAGACCATGACC 20989
| || | | | || ||| | | ||||| ||||| || ||||| ||||||||
Sbjct 8529 TTCGATGCCGGATGGACAGACTTAGCGCAATCGTTCATGGCGATTCGCAAAACCATGACG 8470
Query 20990 AGCAGCGGACGCAGCGCCACCTATGAGGCCAGCCGCAGCGAGGAAGCCAGCCACGCCGAT 21049
|||||| | | ||| ||||| || ||||| | |||| || | | ||||| ||
Sbjct 8469 GCGAGCGGAAAGAAAGTCACTTATGAAGCGAGCCGTAACGAGCAAACAGGACACGCGGAC 8410
Query 21050 CTCGCCTGGGCGACTATGCACGCCCT 21075
|| ||||||||| ||||||| ||
Sbjct 8409 CTTGCCTGGGCGTGCCTGCACGCGCT 8384
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 104351973764478
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